RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CCDC47Q96A33 483 aaKnown RBP13.6□□□□□ -0.23
PTCD1-205ENST00000485746 PAGE5Q96GU1 130 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 CCDC34Q96HJ3 373 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 RIPOR3Q96MK2 946 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 TSPAN18Q96SJ8 248 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 FAM213AQ9BRX8 229 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 STRA6Q9BX79 667 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 IKZF4Q9H2S9 585 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 PCIF1Q9H4Z3 704 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 RXFP1Q9HBX9 757 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 EXOC1Q9NV70 894 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 FNIP2Q9P278 1114 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 TUBGCP4Q9UGJ1 667 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 CPSF3Q9UKF6 684 aaKnown RBP13.6□□□□□ -0.23
PTCD1-205ENST00000485746 PRUNE2Q8WUY3 3088 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 PVALEFA0A1B0GWK0 134 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 SPATA31D3P0C874 917 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 CYP3A5P20815 502 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 TKTP29401 623 aaKnown RBP13.59□□□□□ -0.23
PTCD1-205ENST00000485746 MTHFRP42898 656 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 RTP2Q5QGT7 225 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 ATAT1Q5SQI0 421 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 CNNM4Q6P4Q7 775 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 TMC5Q6UXY8 1006 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 DSTYKQ6XUX3 929 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 SPATA31D4Q6ZUB0 917 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 PIK3R5Q8WYR1 880 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 SAAL1Q96ER3 474 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 RPGRIP1Q96KN7 1286 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 FGFBP2Q9BYJ0 223 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 S1PR5Q9H228 398 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 ADAM7Q9H2U9 754 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 SFXN1Q9H9B4 322 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 SLC39A2Q9NP94 309 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 MAN1C1Q9NR34 630 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 STYXL1Q9Y6J8 313 aa13.59□□□□□ -0.23
PTCD1-205ENST00000485746 A0A1W2PQ27 194 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 A0A1W2PQ64 194 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 A0A1W2PQD8 194 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 GOLGA8IPA6NC78 632 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 GOLGA8JA6NMD2 632 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 H7C4K7 107 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 EIF3DO15371 548 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTCD1-205ENST00000485746 MEFVO15553 781 aaPredicted RBP13.58□□□□□ -0.24
PTCD1-205ENST00000485746 ACTN4O43707 911 aaKnown RBP13.58□□□□□ -0.24
PTCD1-205ENST00000485746 IL18RAPO95256 599 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 EFEMP2O95967 443 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 WEE2P0C1S8 567 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 GARTP22102 1010 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 IGFBP6P24592 240 aaPredicted RBP13.58□□□□□ -0.24
PTCD1-205ENST00000485746 ANP32AP39687 249 aaKnown RBP13.58□□□□□ -0.24
PTCD1-205ENST00000485746 NDUFA8P51970 172 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 ARPP19P56211 112 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 ZP2Q05996 745 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 CBX2Q14781 532 aaPredicted RBP13.58□□□□□ -0.24
PTCD1-205ENST00000485746 KANK3Q6NY19 840 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 ANKS3Q6ZW76 656 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 NELFCDQ8IXH7 590 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 C3orf58Q8NDZ4 430 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 APPL2Q8NEU8 664 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 LNX1Q8TBB1 728 aaPredicted RBP13.58□□□□□ -0.24
PTCD1-205ENST00000485746 NECTIN4Q96NY8 510 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 PHF7Q9BWX1 381 aaPredicted RBP13.58□□□□□ -0.24
PTCD1-205ENST00000485746 ASB7Q9H672 318 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 PIDD1Q9HB75 910 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 TSHZ2Q9NRE2 1034 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 DERAQ9Y315 318 aa13.58□□□□□ -0.24
PTCD1-205ENST00000485746 SYN3O14994 580 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 TGM5O43548 720 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 EXTL3O43909 919 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 FAM189A1O60320 539 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 NFICP08651 508 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 FGFR3P22607 806 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 SP100P23497 879 aaPredicted RBP13.57□□□□□ -0.24
PTCD1-205ENST00000485746 ADSSP30520 456 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 GUCY2FP51841 1108 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 LIN9Q5TKA1 542 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 SPATA1Q5VX52 437 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 HS2ST1Q7LGA3 356 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 USP37Q86T82 979 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 GPD1LQ8N335 351 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 KREMEN2Q8NCW0 462 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 GLIS3Q8NEA6 775 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
PTCD1-205ENST00000485746 CBWD1Q9BRT8 395 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 PLEKHA4Q9H4M7 779 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 RBAKQ9NYW8 714 aaPredicted RBP13.57□□□□□ -0.24
PTCD1-205ENST00000485746 HPSEQ9Y251 543 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 R3HCC1Q9Y3T6 440 aaKnown RBP13.57□□□□□ -0.24
PTCD1-205ENST00000485746 NR2E1Q9Y466 385 aa13.57□□□□□ -0.24
PTCD1-205ENST00000485746 MYO7AQ13402 2215 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 CCDC195A0A1B0GUA6 201 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 KIAA0391O15091 583 aaKnown RBP13.56□□□□□ -0.24
PTCD1-205ENST00000485746 ZNF202O95125 648 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 MYL1P05976 194 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 ADRB2P07550 413 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 LRPAP1P30533 357 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 ELF1P32519 619 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 OR1D2P34982 312 aa13.56□□□□□ -0.24
PTCD1-205ENST00000485746 TFAMQ00059 246 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms