RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 VARS2Q5ST30 1063 aaKnown RBP18.74■□□□□ 0.59
SMC4-216ENST00000485645 PARM1Q6UWI2 310 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 ZPBP2Q6X784 338 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 MTSS1LQ765P7 747 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 DTWD2Q8NBA8 298 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 FGF14Q92915 247 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 C18orf25Q96B23 403 aaPredicted RBP18.74■□□□□ 0.59
SMC4-216ENST00000485645 AK8Q96MA6 479 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 TBC1D17Q9HA65 648 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 SLC2A4RGQ9NR83 387 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 DNMT3BQ9UBC3 853 aaKnown RBP18.74■□□□□ 0.59
SMC4-216ENST00000485645 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.74■□□□□ 0.59
SMC4-216ENST00000485645 MYO15AQ9UKN7 3530 aa18.74■□□□□ 0.59
SMC4-216ENST00000485645 NPHP3-ACAD11A0A0J9YXS1 232 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 H7C4K7 107 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 CLDN3O15551 220 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 SLC26A4O43511 780 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 ELF1P32519 619 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 MATR3P43243 847 aaKnown RBP eCLIP18.73■□□□□ 0.597e-8■■□□□ 11.8
SMC4-216ENST00000485645 ROR1Q01973 937 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
SMC4-216ENST00000485645 MCL1Q07820 350 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 SLC10A6Q3KNW5 377 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 PABPC1LQ4VXU2 614 aaKnown RBP18.73■□□□□ 0.59
SMC4-216ENST00000485645 SEZ6Q53EL9 994 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 LARP1BQ659C4 914 aaKnown RBP18.73■□□□□ 0.59
SMC4-216ENST00000485645 SLC8B1Q6J4K2 584 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 ZNF461Q8TAF7 563 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 ITFG1Q8TB96 612 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 RPP25Q9BUL9 199 aaKnown RBP18.73■□□□□ 0.59
SMC4-216ENST00000485645 ARHGEF3Q9NR81 526 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 HCFC1R1Q9NWW0 138 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 KCNH3Q9ULD8 1083 aa18.73■□□□□ 0.59
SMC4-216ENST00000485645 MEFVO15553 781 aaPredicted RBP18.72■□□□□ 0.59
SMC4-216ENST00000485645 ABLIM3O94929 683 aa18.72■□□□□ 0.59
SMC4-216ENST00000485645 UBA7P41226 1012 aa18.72■□□□□ 0.59
SMC4-216ENST00000485645 ARPP19P56211 112 aa18.72■□□□□ 0.59
SMC4-216ENST00000485645 ANGPT1Q15389 498 aa18.72■□□□□ 0.59
SMC4-216ENST00000485645 ARSHQ5FYA8 562 aa18.72■□□□□ 0.59
SMC4-216ENST00000485645 PHLDB3Q6NSJ2 640 aa18.72■□□□□ 0.59
SMC4-216ENST00000485645 BICD1Q96G01 975 aa18.72■□□□□ 0.59
SMC4-216ENST00000485645 CALML4Q96GE6 196 aa18.72■□□□□ 0.59
SMC4-216ENST00000485645 ODF2LQ9ULJ1 636 aa18.72■□□□□ 0.59
SMC4-216ENST00000485645 PTPRZ1P23471 2315 aaPredicted RBP18.71■□□□□ 0.59
SMC4-216ENST00000485645 DMDP11532 3685 aa18.71■□□□□ 0.59
SMC4-216ENST00000485645 WDR27A2RRH5 827 aa18.71■□□□□ 0.59
SMC4-216ENST00000485645 LRG1P02750 347 aa18.71■□□□□ 0.59
SMC4-216ENST00000485645 MCM4P33991 863 aa18.71■□□□□ 0.59
SMC4-216ENST00000485645 NCKAP1LP55160 1127 aa18.71■□□□□ 0.59
SMC4-216ENST00000485645 GPC5P78333 572 aa18.71■□□□□ 0.59
SMC4-216ENST00000485645 MRPL58Q14197 206 aaKnown RBP18.71■□□□□ 0.59
SMC4-216ENST00000485645 HAUS6Q7Z4H7 955 aa18.71■□□□□ 0.59
SMC4-216ENST00000485645 SUSD3Q96L08 255 aa18.71■□□□□ 0.59
SMC4-216ENST00000485645 PLEKHA5Q9HAU0 1116 aa18.71■□□□□ 0.59
SMC4-216ENST00000485645 MRPS23Q9Y3D9 190 aaKnown RBP18.71■□□□□ 0.59
SMC4-216ENST00000485645 NOTCH4Q99466 2003 aa18.71■□□□□ 0.59
SMC4-216ENST00000485645 ARHGEF37A1IGU5 675 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 PRRG1O14668 218 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 TBC1D4O60343 1298 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 BMP15O95972 392 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 RHOP08100 348 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 CLTAP09496 248 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 CXCL8P10145 99 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 ATF2P15336 505 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 PTPN2P17706 415 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 DHX8Q14562 1220 aaKnown RBP18.7■□□□□ 0.58
SMC4-216ENST00000485645 CTXN3Q4LDR2 81 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 ASCL5Q7RTU5 278 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 FRMD5Q7Z6J6 570 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 GPBP1Q86WP2 473 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 NPAS3Q8IXF0 933 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 APPL2Q8NEU8 664 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 ING5Q8WYH8 240 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 SHDQ96IW2 340 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 TBC1D32Q96NH3 1257 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 REEP2Q9BRK0 252 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 HAPLN2Q9GZV7 340 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 CYP4F11Q9HBI6 524 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 TUBGCP4Q9UGJ1 667 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 FBXL5Q9UKA1 691 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 SIT1Q9Y3P8 196 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 MYH15Q9Y2K3 1946 aa18.7■□□□□ 0.58
SMC4-216ENST00000485645 PDCD11Q14690 1871 aaKnown RBP18.69■□□□□ 0.58
SMC4-216ENST00000485645 PRR23AA6NEV1 266 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 FAM13AO94988 1023 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 SCP2P22307 547 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 MARCKSP29966 332 aaPredicted RBP18.69■□□□□ 0.58
SMC4-216ENST00000485645 LONP1P36776 959 aaKnown RBP18.69■□□□□ 0.58
SMC4-216ENST00000485645 LIG4P49917 911 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 KYAT1Q16773 422 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 TPGS2Q68CL5 300 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 ZNF280DQ6N043 979 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 BRAPQ7Z569 592 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 TCEAL8Q8IYN2 117 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 MYCT1Q8N699 235 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 RASSF8Q8NHQ8 419 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 DDX12PQ92771 950 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 KCNN1Q92952 543 aa18.69■□□□□ 0.58
SMC4-216ENST00000485645 NKD2Q969F2 451 aaPredicted RBP18.69■□□□□ 0.58
SMC4-216ENST00000485645 KIF12Q96FN5 646 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms