RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 MED15Q96RN5 788 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 NEU1Q99519 415 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 ADAM2Q99965 735 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 MYOCQ99972 504 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 SPATA5L1Q9BVQ7 753 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 PUS7LQ9H0K6 701 aaKnown RBP5.58□□□□□ -1.52
SMC4-215ENST00000484799 SPC25Q9HBM1 224 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 ADARB2Q9NS39 739 aaKnown RBP5.58□□□□□ -1.52
SMC4-215ENST00000484799 TDP1Q9NUW8 608 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 SYBUQ9NX95 663 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 FAM30AQ9NZY2 134 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 DKK2Q9UBU2 259 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 KCNE5Q9UJ90 142 aa5.58□□□□□ -1.52
SMC4-215ENST00000484799 TRGV11A0A075B6L2 103 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 MTHFD1P11586 935 aaKnown RBP5.57□□□□□ -1.52
SMC4-215ENST00000484799 FPR1P21462 350 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 SLC6A2P23975 617 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 GUCY1A2P33402 732 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 MTNR1BP49286 362 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 OCA2Q04671 838 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 CCDC142Q17RM4 750 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 FBXO42Q6P3S6 717 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 LHFPL2Q6ZUX7 228 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 SEM1Q6ZVN7 128 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 GPR149Q86SP6 731 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 NRG4Q8WWG1 115 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 AIFM2Q9BRQ8 373 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 C11orf54Q9H0W9 315 aaPredicted RBP5.57□□□□□ -1.52
SMC4-215ENST00000484799 FBXO34Q9NWN3 711 aa5.57□□□□□ -1.52
SMC4-215ENST00000484799 LOC105371045A0A1W2PR82 267 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 CDHR4A6H8M9 788 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 MYADML2A6NDP7 307 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 PEX1O43933 1283 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 ELANEP08246 267 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 VIL1P09327 827 aaKnown RBP5.56□□□□□ -1.52
SMC4-215ENST00000484799 AGXTP21549 392 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 MPLP40238 635 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 FPGSQ05932 587 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 FOXI1Q12951 378 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 SEPT2Q15019 361 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 PRR16Q569H4 304 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 AKNAD1Q5T1N1 836 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 B3GNTL1Q67FW5 361 aaPredicted RBP5.56□□□□□ -1.52
SMC4-215ENST00000484799 PPP4R3AQ6IN85 833 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.56□□□□□ -1.52
SMC4-215ENST00000484799 Q6ZNX1 250 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 GADL1Q6ZQY3 521 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 CNTD1Q8N815 330 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 HDAC10Q969S8 669 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 USP25Q9UHP3 1055 aa5.56□□□□□ -1.52
SMC4-215ENST00000484799 MAST3O60307 1309 aa5.55□□□□□ -1.52
SMC4-215ENST00000484799 KLHL33A6NCF5 533 aa5.55□□□□□ -1.52
SMC4-215ENST00000484799 XPOTO43592 962 aaKnown RBP5.55□□□□□ -1.52
SMC4-215ENST00000484799 CCND1P24385 295 aa5.55□□□□□ -1.52
SMC4-215ENST00000484799 PCSK1P29120 753 aa5.55□□□□□ -1.52
SMC4-215ENST00000484799 TMX3Q96JJ7 454 aa5.55□□□□□ -1.52
SMC4-215ENST00000484799 SYNPO2LQ9H987 977 aa5.55□□□□□ -1.52
SMC4-215ENST00000484799 MAN1C1Q9NR34 630 aa5.55□□□□□ -1.52
SMC4-215ENST00000484799 TMEM74BQ9NUR3 256 aa5.55□□□□□ -1.52
SMC4-215ENST00000484799 SLC23A1Q9UHI7 598 aa5.55□□□□□ -1.52
SMC4-215ENST00000484799 SIK3Q9Y2K2 1263 aa5.55□□□□□ -1.52
SMC4-215ENST00000484799 MARCH11A6NNE9 402 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 C1RP00736 705 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 LMO1P25800 156 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 CTXN1P60606 82 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 ITKQ08881 620 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 ZNF844Q08AG5 666 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 CYP2A13Q16696 494 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 PREPLQ4J6C6 727 aaPredicted RBP5.54□□□□□ -1.52
SMC4-215ENST00000484799 PNMA8AQ86V59 439 aaPredicted RBP5.54□□□□□ -1.52
SMC4-215ENST00000484799 ARHGEF25Q86VW2 580 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 BOLLQ8N9W6 283 aaKnown RBP5.54□□□□□ -1.52
SMC4-215ENST00000484799 SIMC1Q8NDZ2 872 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 HOXB13Q92826 284 aaPredicted RBP5.54□□□□□ -1.52
SMC4-215ENST00000484799 PACSIN1Q9BY11 444 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 PCDHA13Q9Y5I0 950 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 PHLDB1Q86UU1 1377 aa5.54□□□□□ -1.52
SMC4-215ENST00000484799 NDUFS2O75306 463 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 HAUS5O94927 633 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 PRSS23O95084 383 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 MYBL2P10244 700 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 SLC6A9P48067 706 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 VAV2P52735 878 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 ERVK-21P61565 698 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 NOMO3P69849 1222 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 MTM1Q13496 603 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 ZNF169Q14929 603 aaPredicted RBP5.53□□□□□ -1.52
SMC4-215ENST00000484799 NOMO2Q5JPE7 1267 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 UTP14CQ5TAP6 766 aaKnown RBP5.53□□□□□ -1.52
SMC4-215ENST00000484799 DDX42Q86XP3 938 aaKnown RBP eCLIP5.53□□□□□ -1.52
SMC4-215ENST00000484799 ACTRT2Q8TDY3 377 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 ZNF764Q96H86 408 aaPredicted RBP5.53□□□□□ -1.52
SMC4-215ENST00000484799 NEU2Q9Y3R4 380 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 COX11Q9Y6N1 276 aa5.53□□□□□ -1.52
SMC4-215ENST00000484799 AMY1AP04745 511 aa5.52□□□□□ -1.53
SMC4-215ENST00000484799 SMARCA1P28370 1054 aa5.52□□□□□ -1.53
SMC4-215ENST00000484799 RARRES1P49788 294 aa5.52□□□□□ -1.53
SMC4-215ENST00000484799 PABPC1LQ4VXU2 614 aaKnown RBP5.52□□□□□ -1.53
SMC4-215ENST00000484799 EGFLAMQ63HQ2 1017 aa5.52□□□□□ -1.53
SMC4-215ENST00000484799 NECAB2Q7Z6G3 386 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms