RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 LIN9Q5TKA1 542 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 SV2BQ7L1I2 683 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 DAW1Q8N136 415 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 GSTCDQ8NEC7 633 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 BSNDQ8WZ55 320 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 CLIC6Q96NY7 704 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 PAAF1Q9BRP4 392 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 ADPGKQ9BRR6 497 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 BCO2Q9BYV7 579 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 KMT5AQ9NQR1 393 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 FAM13BQ9NYF5 915 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 ARHGAP28Q9P2N2 729 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 CDH7Q9ULB5 785 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 ZDHHC9Q9Y397 364 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 DMDP11532 3685 aa10.95□□□□□ -0.66
CPSF4-213ENST00000484112 SF3B1O75533 1304 aaKnown RBP eCLIP10.94□□□□□ -0.662e-6■■■■■ 59.4
CPSF4-213ENST00000484112 KANSL1LA0AUZ9 987 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 FAM170BA6NMN3 283 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 CCDC169A6NNP5 214 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 LAMTOR5O43504 91 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 PRKCBP05771 671 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 C8AP07357 584 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 MAPTP10636 758 aaKnown RBP10.94□□□□□ -0.66
CPSF4-213ENST00000484112 CD72P21854 359 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 STAT6P42226 847 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 ME1P48163 572 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 PEX3P56589 373 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 AMPD3Q01432 767 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 CSTF1Q05048 431 aaKnown RBP10.94□□□□□ -0.66
CPSF4-213ENST00000484112 DNM1Q05193 864 aaKnown RBP10.94□□□□□ -0.66
CPSF4-213ENST00000484112 TMEM132AQ24JP5 1023 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 RSPO4Q2I0M5 234 aaPredicted RBP10.94□□□□□ -0.66
CPSF4-213ENST00000484112 DCAF4L1Q3SXM0 396 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 SLC44A4Q53GD3 710 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 ARSHQ5FYA8 562 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 AXDND1Q5T1B0 1012 aaPredicted RBP10.94□□□□□ -0.66
CPSF4-213ENST00000484112 FAM171A1Q5VUB5 890 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 GPBP1Q86WP2 473 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 MAML2Q8IZL2 1156 aaPredicted RBP10.94□□□□□ -0.66
CPSF4-213ENST00000484112 IQUBQ8NA54 791 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 FGF13Q92913 245 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 PLIN2Q99541 437 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 CLSTN3Q9BQT9 956 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 TTPALQ9BTX7 342 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 TNMDQ9H2S6 317 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 ST6GALNAC4Q9H4F1 302 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 PARVGQ9HBI0 331 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 NCDNQ9UBB6 729 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 SEL1LQ9UBV2 794 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 FBXW11Q9UKB1 542 aa10.94□□□□□ -0.66
CPSF4-213ENST00000484112 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
CPSF4-213ENST00000484112 MTF2Q9Y483 593 aaPredicted RBP10.94□□□□□ -0.66
CPSF4-213ENST00000484112 ZFP37Q9Y6Q3 630 aaPredicted RBP10.94□□□□□ -0.66
CPSF4-213ENST00000484112 SPTBN4Q9H254 2564 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 TBCAO75347 108 aaKnown RBP10.93□□□□□ -0.66
CPSF4-213ENST00000484112 PAPLNO95428 1278 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 C1RP00736 705 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 KRT18P05783 430 aaKnown RBP10.93□□□□□ -0.66
CPSF4-213ENST00000484112 GAP43P17677 238 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 NCKAP1LP55160 1127 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 STRN3Q13033 797 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 MCM6Q14566 821 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 MLF2Q15773 248 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-213ENST00000484112 PSMD5Q16401 504 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 VARS2Q5ST30 1063 aaKnown RBP10.93□□□□□ -0.66
CPSF4-213ENST00000484112 FOXD4L5Q5VV16 416 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-213ENST00000484112 ADALQ6DHV7 355 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 ZPBP2Q6X784 338 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 USP49Q70CQ1 688 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 MTSS1LQ765P7 747 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 GPR65Q8IYL9 337 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 SUMF1Q8NBK3 374 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 ITFG1Q8TB96 612 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 LNX1Q8TBB1 728 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-213ENST00000484112 ATRIPQ8WXE1 791 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 FOXD4L4Q8WXT5 416 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-213ENST00000484112 SPATA32Q96LK8 384 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 KXD1Q9BQD3 176 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 REEP2Q9BRK0 252 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 MRPL4Q9BYD3 311 aaKnown RBP10.93□□□□□ -0.66
CPSF4-213ENST00000484112 USP25Q9UHP3 1055 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 PCDHA7Q9UN72 937 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 TNFSF13BQ9Y275 285 aa10.93□□□□□ -0.66
CPSF4-213ENST00000484112 ADAM12O43184 909 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 TRAK2O60296 914 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 XYLBO75191 536 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 FAM13AO94988 1023 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 KIF4AO95239 1232 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 HNRNPA1P09651 372 aaKnown RBP eCLIP10.92□□□□□ -0.66
CPSF4-213ENST00000484112 LIG1P18858 919 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 CMA1P23946 247 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 ANP32AP39687 249 aaKnown RBP10.92□□□□□ -0.66
CPSF4-213ENST00000484112 PRKCQQ04759 706 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 TUSC3Q13454 348 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 RESP18Q5W5W9 173 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 CNNM4Q6P4Q7 775 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 SHC4Q6S5L8 630 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 TMEM161BQ8NDZ6 487 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 SLC7A14Q8TBB6 771 aa10.92□□□□□ -0.66
CPSF4-213ENST00000484112 ING5Q8WYH8 240 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms