RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 USP18Q9UMW8 372 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 SMIM28A0A1B0GU29 152 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 ARNTLO00327 626 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 ADRB1P08588 477 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 CHRNB1P11230 501 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 LIG1P18858 919 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 SDHBP21912 280 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 KRT2P35908 639 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 VIPR2P41587 438 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 SATB1Q01826 763 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 LMNB2Q03252 620 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 SRSF5Q13243 272 aaKnown RBP14.2□□□□□ -0.14
UBR4-213ENST00000483922 ECM1Q16610 540 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 XKR4Q5GH76 650 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 VITQ6UXI7 678 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 RTL10Q7L3V2 364 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 DNASE1L2Q92874 299 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 ASB16Q96NS5 453 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 CORO1BQ9BR76 489 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 ORC3Q9UBD5 711 aaPredicted RBP14.2□□□□□ -0.14
UBR4-213ENST00000483922 CDV3Q9UKY7 258 aaKnown RBP14.2□□□□□ -0.14
UBR4-213ENST00000483922 FRYQ5TBA9 3013 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 ASPMQ8IZT6 3477 aa14.2□□□□□ -0.14
UBR4-213ENST00000483922 F5P12259 2224 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 NCAM2O15394 837 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 GDF9O60383 454 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 REC8O95072 547 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 LARGE1O95461 756 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 ATF2P15336 505 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 GJA1P17302 382 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 CYP11B2P19099 503 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 MAPK6Q16659 721 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 PADI6Q6TGC4 694 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 ANKS3Q6ZW76 656 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 TCEAL8Q8IYN2 117 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 NECAB1Q8N987 351 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 FAM126AQ9BYI3 521 aaPredicted RBP14.19□□□□□ -0.14
UBR4-213ENST00000483922 PTPRHQ9HD43 1115 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 CEP72Q9P209 647 aa14.19□□□□□ -0.14
UBR4-213ENST00000483922 TRIP11Q15643 1979 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 VNN2O95498 520 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 NAMPTP43490 491 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 ARPP19P56211 112 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 ZBTB8OSQ8IWT0 167 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 MCPH1Q8NEM0 835 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 FAM3CQ92520 227 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 LRRC3BQ96PB8 259 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 POLR3CQ9BUI4 534 aaPredicted RBP14.18□□□□□ -0.14
UBR4-213ENST00000483922 TRMT61BQ9BVS5 477 aaKnown RBP14.18□□□□□ -0.14
UBR4-213ENST00000483922 C2orf40Q9H1Z8 148 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 BRD9Q9H8M2 597 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 ZFP14Q9HCL3 533 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 TUFT1Q9NNX1 390 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 TRPV5Q9NQA5 729 aa14.18□□□□□ -0.14
UBR4-213ENST00000483922 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.17□□□□□ -0.14
UBR4-213ENST00000483922 K7ESF4 209 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 ABLIM1O14639 778 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 SLC30A4O14863 429 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 EPB41L2O43491 1005 aaKnown RBP14.17□□□□□ -0.14
UBR4-213ENST00000483922 NEMFO60524 1076 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 CDKL5O76039 1030 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 MICAL2O94851 1124 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 XBP1P17861 261 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 GDI1P31150 447 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 ME3Q16798 604 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 PPM1JQ5JR12 505 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 ATF7IP2Q5U623 682 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 TAS1R3Q7RTX0 852 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 GPIHBP1Q8IV16 184 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 CELF5Q8N6W0 485 aaKnown RBP14.17□□□□□ -0.14
UBR4-213ENST00000483922 SECISBP2LQ93073 1101 aaKnown RBP14.17□□□□□ -0.14
UBR4-213ENST00000483922 C18orf25Q96B23 403 aaPredicted RBP14.17□□□□□ -0.14
UBR4-213ENST00000483922 NACC1Q96RE7 527 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 LRRC3Q9BY71 257 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 CYP4F11Q9HBI6 524 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 RBM12Q9NTZ6 932 aaKnown RBP14.17□□□□□ -0.14
UBR4-213ENST00000483922 FBXL5Q9UKA1 691 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 MRPS17Q9Y2R5 130 aaKnown RBP14.17□□□□□ -0.14
UBR4-213ENST00000483922 INSL5Q9Y5Q6 135 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 LAMA1P25391 3075 aa14.17□□□□□ -0.14
UBR4-213ENST00000483922 TICRRQ7Z2Z1 1910 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 CHURC1-FNTBB4DL54 471 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 MAN2B1O00754 1011 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 LRG1P02750 347 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 RETP07949 1114 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 PSMC3P17980 439 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 CCNE1P24864 410 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 SOX9P48436 509 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 FNTBP49356 437 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 FOSBP53539 338 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 OSTNP61366 133 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 DCAF4L1Q3SXM0 396 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 LAIR1Q6GTX8 287 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 TXNDC11Q6PKC3 985 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 DIS3L2Q8IYB7 885 aaKnown RBP14.16□□□□□ -0.14
UBR4-213ENST00000483922 DEPTORQ8TB45 409 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 SMARCD2Q92925 531 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 IRF7Q92985 503 aa14.16□□□□□ -0.14
UBR4-213ENST00000483922 CCDC43Q96MW1 224 aaKnown RBP14.16□□□□□ -0.14
UBR4-213ENST00000483922 UROC1Q96N76 676 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms