RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 MCF2P10911 925 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 LONP1P36776 959 aaKnown RBP14.01□□□□□ -0.17
COL21A1-209ENST00000482933 RAD51AP2Q09MP3 1159 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 GLRA4Q5JXX5 417 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 RTP2Q5QGT7 225 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 DCLRE1AQ6PJP8 1040 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 MPZL3Q6UWV2 235 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 TAS1R3Q7RTX0 852 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 CEP57Q86XR8 500 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 GLYCTKQ8IVS8 523 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 PIK3R5Q8WYR1 880 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 ACAP3Q96P50 834 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 PPP1R10Q96QC0 940 aaKnown RBP14.01□□□□□ -0.17
COL21A1-209ENST00000482933 CXCL16Q9H2A7 254 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 ZDHHC7Q9NXF8 308 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 MTCL1Q9Y4B5 1905 aaKnown RBP14.01□□□□□ -0.17
COL21A1-209ENST00000482933 MYH11P35749 1972 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 DENND4AQ7Z401 1863 aa14.01□□□□□ -0.17
COL21A1-209ENST00000482933 SMIM28A0A1B0GU29 152 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 TRAPPC3O43617 180 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 B3GAT3O94766 335 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 BRD1O95696 1058 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 RPL17P18621 184 aaKnown RBP14□□□□□ -0.17
COL21A1-209ENST00000482933 PROZP22891 400 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 OSTNP61366 133 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
COL21A1-209ENST00000482933 PSMD5Q16401 504 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 XKR4Q5GH76 650 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 LILRA6Q6PI73 481 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 PRSS55Q6UWB4 352 aaPredicted RBP14□□□□□ -0.17
COL21A1-209ENST00000482933 PDZRN4Q6ZMN7 1036 aaPredicted RBP14□□□□□ -0.17
COL21A1-209ENST00000482933 FBXL6Q8N531 539 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 CEP120Q8N960 986 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 TMEM161BQ8NDZ6 487 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 RASSF8Q8NHQ8 419 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 LNX1Q8TBB1 728 aaPredicted RBP14□□□□□ -0.17
COL21A1-209ENST00000482933 ASIC4Q96FT7 647 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 PRRX2Q99811 253 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 PIDD1Q9HB75 910 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 WDR6Q9NNW5 1121 aaKnown RBP14□□□□□ -0.17
COL21A1-209ENST00000482933 LIMD1Q9UGP4 676 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 ODF2LQ9ULJ1 636 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 C2orf16Q68DN1 1984 aa14□□□□□ -0.17
COL21A1-209ENST00000482933 VPS37CA5D8V6 355 aaPredicted RBP13.99□□□□□ -0.17
COL21A1-209ENST00000482933 TOM1L1O75674 476 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 RFPL2O75678 378 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 PAPLNO95428 1278 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 SPATA31D3P0C874 917 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 SCP2P22307 547 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 CLCNKBP51801 687 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 UPP1Q16831 310 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 ALKAL1Q6UXT8 129 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 ZPBP2Q6X784 338 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 SPATA31D4Q6ZUB0 917 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 SMG7Q92540 1137 aaKnown RBP13.99□□□□□ -0.17
COL21A1-209ENST00000482933 MYO10Q9HD67 2058 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 TRIP11Q15643 1979 aa13.99□□□□□ -0.17
COL21A1-209ENST00000482933 ABLIM1O14639 778 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 ASGR2P07307 311 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 MYBP10242 640 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 MAPTP10636 758 aaKnown RBP13.98□□□□□ -0.17
COL21A1-209ENST00000482933 HARSP12081 509 aaKnown RBP13.98□□□□□ -0.17
COL21A1-209ENST00000482933 NOLC1Q14978 699 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL21A1-209ENST00000482933 FEZF2Q8TBJ5 459 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 KCNN1Q92952 543 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 SNX27Q96L92 541 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 CLSTN3Q9BQT9 956 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 FBXW11Q9UKB1 542 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 CLUHO75153 1309 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 CLDN3O15551 220 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 ZMYND10O75800 440 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 FAM13AO94988 1023 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 KRT18P05783 430 aaKnown RBP13.98□□□□□ -0.17
COL21A1-209ENST00000482933 KCNE1P15382 129 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 FGFR3P22607 806 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 GBP2P32456 591 aaPredicted RBP13.98□□□□□ -0.17
COL21A1-209ENST00000482933 ABCD1P33897 745 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 MATR3P43243 847 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL21A1-209ENST00000482933 GCGRP47871 477 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 NCKAP1LP55160 1127 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 DHX8Q14562 1220 aaKnown RBP13.98□□□□□ -0.17
COL21A1-209ENST00000482933 ARSHQ5FYA8 562 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 LIN9Q5TKA1 542 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 ANKS3Q6ZW76 656 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 GPBP1Q86WP2 473 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 ZNF707Q96C28 371 aaPredicted RBP13.98□□□□□ -0.17
COL21A1-209ENST00000482933 BICD1Q96G01 975 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 INTS4Q96HW7 963 aaKnown RBP13.98□□□□□ -0.17
COL21A1-209ENST00000482933 ZBTB45Q96K62 511 aaPredicted RBP13.98□□□□□ -0.17
COL21A1-209ENST00000482933 PHOX2BQ99453 314 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 SPSB2Q99619 263 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 CCSER1Q9C0I3 900 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 GOLGA2P5Q9HBQ8 144 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 CNTN3Q9P232 1028 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 IGSF9Q9P2J2 1179 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 ANKFY1Q9P2R3 1169 aa13.98□□□□□ -0.17
COL21A1-209ENST00000482933 CITO14578 2027 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 NPHP3-ACAD11A0A0J9YXS1 232 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 PODXLO00592 558 aa13.97□□□□□ -0.17
COL21A1-209ENST00000482933 HNRNPA1P09651 372 aaKnown RBP eCLIP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms