RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 FSCN2O14926 492 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 TGFB1I1O43294 461 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 LGR5O75473 907 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 HAUS5O94927 633 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 LYNP07948 512 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 ZCCHC18P0CG32 403 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 TROVE2P10155 538 aaKnown RBP eCLIP11.72□□□□□ -0.53
RPGR-208ENST00000482855 KRT15P19012 456 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 CA4P22748 312 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 SLC18A1P54219 525 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 CYP4F22Q6NT55 531 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 KIAA0825Q8IV33 1275 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 SCYL3Q8IZE3 742 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 ERMNQ8TAM6 284 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 ZNF564Q8TBZ8 553 aaPredicted RBP11.72□□□□□ -0.53
RPGR-208ENST00000482855 ZNF398Q8TD17 642 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 ATG4AQ8WYN0 398 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 BTBD6Q96KE9 485 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 DDX50Q9BQ39 737 aaKnown RBP11.72□□□□□ -0.53
RPGR-208ENST00000482855 CENPKQ9BS16 269 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 GRID1Q9ULK0 1009 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 RPS6KL1Q9Y6S9 549 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 TRIM49P0CI25 452 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 TRIM49CP0CI26 452 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 RFX1P22670 979 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 RPA3P35244 121 aaPredicted RBP11.72□□□□□ -0.53
RPGR-208ENST00000482855 ASPRV1Q53RT3 343 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 DAB2IPQ5VWQ8 1189 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 PHLDB3Q6NSJ2 640 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 KSR1Q8IVT5 923 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 NCSTNQ92542 709 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 MKNK1Q9BUB5 465 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 CCDC28BQ9BUN5 200 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 NUP85Q9BW27 656 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 CYLDQ9NQC7 956 aa11.72□□□□□ -0.53
RPGR-208ENST00000482855 PNMA6FA0A0J9YX94 578 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 CFAP69A5D8W1 941 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 CAMTA2O94983 1202 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 LDHBP07195 334 aaKnown RBP11.71□□□□□ -0.53
RPGR-208ENST00000482855 ABHD2P08910 425 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 IMPDH2P12268 514 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 WDR72Q3MJ13 1102 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 C16orf86Q6ZW13 317 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 LCA5Q86VQ0 697 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 SLFN12Q8IYM2 578 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 C4orf33Q8N1A6 199 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 BBOF1Q8ND07 529 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 CFAP57Q96MR6 1250 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 OCEL1Q9H607 264 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 GPCPD1Q9NPB8 672 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 KRT82Q9NSB4 513 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 SENP1Q9P0U3 644 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 FRMD4BQ9Y2L6 1034 aa11.71□□□□□ -0.53
RPGR-208ENST00000482855 UMODL1Q5DID0 1318 aa11.71□□□□□ -0.54
RPGR-208ENST00000482855 SH3BGRP55822 239 aaPredicted RBP11.71□□□□□ -0.54
RPGR-208ENST00000482855 CERKLQ49MI3 558 aaPredicted RBP11.71□□□□□ -0.54
RPGR-208ENST00000482855 PABPC1LQ4VXU2 614 aaKnown RBP11.71□□□□□ -0.54
RPGR-208ENST00000482855 C3orf67Q6ZVT6 689 aa11.71□□□□□ -0.54
RPGR-208ENST00000482855 KBTBD2Q8IY47 623 aa11.71□□□□□ -0.54
RPGR-208ENST00000482855 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.54
RPGR-208ENST00000482855 ZNF75CPQ92670 426 aaPredicted RBP11.71□□□□□ -0.54
RPGR-208ENST00000482855 CELF1Q92879 486 aaKnown RBP11.71□□□□□ -0.54
RPGR-208ENST00000482855 NSL1Q96IY1 281 aa11.71□□□□□ -0.54
RPGR-208ENST00000482855 ASCC2Q9H1I8 757 aaPredicted RBP11.71□□□□□ -0.54
RPGR-208ENST00000482855 IKZF4Q9H2S9 585 aa11.71□□□□□ -0.54
RPGR-208ENST00000482855 KIAA1586Q9HCI6 787 aa11.71□□□□□ -0.54
RPGR-208ENST00000482855 ANKFY1Q9P2R3 1169 aa11.71□□□□□ -0.54
RPGR-208ENST00000482855 DCTN4Q9UJW0 460 aa11.71□□□□□ -0.54
RPGR-208ENST00000482855 ANGPTL2Q9UKU9 493 aa11.71□□□□□ -0.54
RPGR-208ENST00000482855 TTC36A6NLP5 189 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 POC1B-GALNT4F8VUJ3 575 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 PENKP01210 267 aaPredicted RBP11.7□□□□□ -0.54
RPGR-208ENST00000482855 CETN2P41208 172 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 MAGEA4P43358 317 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 SLC1A5Q15758 541 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 LIN52Q52LA3 116 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 CEP128Q6ZU80 1094 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 ZNF365Q70YC5 407 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 RELL1Q8IUW5 271 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 WDR60Q8WVS4 1066 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 PTCD3Q96EY7 689 aaKnown RBP11.7□□□□□ -0.54
RPGR-208ENST00000482855 PSTPIP2Q9H939 334 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 UBE2TQ9NPD8 197 aaPredicted RBP11.7□□□□□ -0.54
RPGR-208ENST00000482855 ARL8BQ9NVJ2 186 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 DDX43Q9NXZ2 648 aaKnown RBP11.7□□□□□ -0.54
RPGR-208ENST00000482855 TMCO1Q9UM00 188 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 COMMD3-BMI1R4GMX3 469 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 DDX60LQ5H9U9 1706 aaKnown RBP11.7□□□□□ -0.54
RPGR-208ENST00000482855 A8MXQ7 604 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 RRM1P23921 792 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 RPA1P27694 616 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 POLD1P28340 1107 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 CYP2J2P51589 502 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 NEK3P51956 506 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 THOC5Q13769 683 aaKnown RBP11.7□□□□□ -0.54
RPGR-208ENST00000482855 PKN2Q16513 984 aaKnown RBP11.7□□□□□ -0.54
RPGR-208ENST00000482855 IZUMO3Q5VZ72 239 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 INTS5Q6P9B9 1019 aaKnown RBP11.7□□□□□ -0.54
RPGR-208ENST00000482855 ZNF804AQ7Z570 1209 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 RBM12BQ8IXT5 1001 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms