RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ACCSQ96QU6 501 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 CLSTN3Q9BQT9 956 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 STRA6Q9BX79 667 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 RHOBTB2Q9BYZ6 727 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 RPF1Q9H9Y2 349 aaKnown RBP12.94□□□□□ -0.34
HMGN1-213ENST00000482192 MAGEF1Q9HAY2 307 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 TSHZ2Q9NRE2 1034 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 KBTBD4Q9NVX7 518 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 FAM13BQ9NYF5 915 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 TBC1D7Q9P0N9 293 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 MUTYHQ9UIF7 546 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 CPSF3Q9UKF6 684 aaKnown RBP12.94□□□□□ -0.34
HMGN1-213ENST00000482192 UBQLN1Q9UMX0 589 aaKnown RBP12.94□□□□□ -0.34
HMGN1-213ENST00000482192 PCDHA7Q9UN72 937 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 PCDHB13Q9Y5F0 798 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 STYXL1Q9Y6J8 313 aa12.94□□□□□ -0.34
HMGN1-213ENST00000482192 MUC3AQ02505 3323 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 CCDC195A0A1B0GUA6 201 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 I3L4J1 428 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 SYN3O14994 580 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 GPR37L1O60883 481 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 ADRB2P07550 413 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 SPATA31D3P0C874 917 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 CYP3A5P20815 502 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 SP100P23497 879 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-213ENST00000482192 TKTP29401 623 aaKnown RBP12.93□□□□□ -0.34
HMGN1-213ENST00000482192 BRCC3P46736 316 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 SPAG1Q07617 926 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 POSTNQ15063 836 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 L1TD1Q5T7N2 865 aaKnown RBP12.93□□□□□ -0.34
HMGN1-213ENST00000482192 RESP18Q5W5W9 173 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 SPATA31D4Q6ZUB0 917 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 CCDC149Q6ZUS6 474 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 STXBP4Q6ZWJ1 553 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 KREMEN2Q8NCW0 462 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 STAMQ92783 540 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 PYM1Q9BRP8 204 aaKnown RBP12.93□□□□□ -0.34
HMGN1-213ENST00000482192 TRIM9Q9C026 710 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 ZDHHC7Q9NXF8 308 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 MTRRQ9UBK8 725 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 RCOR1Q9UKL0 485 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 AGO2Q9UKV8 859 aaKnown RBP12.93□□□□□ -0.34
HMGN1-213ENST00000482192 USTQ9Y2C2 406 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 ATP6V1DQ9Y5K8 247 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 BACE2Q9Y5Z0 518 aa12.93□□□□□ -0.34
HMGN1-213ENST00000482192 LACTBL1A8MY62 500 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 TISP43B9A030 160 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 POLR2DO15514 142 aaKnown RBP12.92□□□□□ -0.34
HMGN1-213ENST00000482192 PAPLNO95428 1278 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 MYBP10242 640 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 LRPAP1P30533 357 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 MCM4P33991 863 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 ACOT2P49753 483 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 CASP5P51878 434 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 KRT85P78386 507 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 POU5F1Q01860 360 aaKnown RBP12.92□□□□□ -0.34
HMGN1-213ENST00000482192 KCNA1Q09470 495 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 RAB33AQ14088 237 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 BECN1Q14457 450 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 ZBTB6Q15916 424 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 LIN9Q5TKA1 542 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 CNNM4Q6P4Q7 775 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 SYCP3Q8IZU3 236 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 TDRD5Q8NAT2 981 aaKnown RBP12.92□□□□□ -0.34
HMGN1-213ENST00000482192 POMGNT1Q8WZA1 660 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 FAM212AQ96EL1 285 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 TMEM206Q9H813 350 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 C11orf16Q9NQ32 467 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 FBXW11Q9UKB1 542 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 DERAQ9Y315 318 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 CDY1Q9Y6F8 540 aa12.92□□□□□ -0.34
HMGN1-213ENST00000482192 PLXNA3P51805 1871 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 BDP1A6H8Y1 2624 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 FAM86C2PA6NEL3 165 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 C2CD4DB7Z1M9 353 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 H7C4K7 107 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 ADAM12O43184 909 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 RFPL2O75678 378 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 ZMYND10O75800 440 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 ADSSP30520 456 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 OR1D2P34982 312 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 ASIC1P78348 528 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 TMEM132DQ14C87 1099 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
HMGN1-213ENST00000482192 SPATA1Q5VX52 437 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 JADE1Q6IE81 842 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 PLCD3Q8N3E9 789 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 BEST2Q8NFU1 509 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 FEZF2Q8TBJ5 459 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 SMG7Q92540 1137 aaKnown RBP12.91□□□□□ -0.34
HMGN1-213ENST00000482192 ZNF707Q96C28 371 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-213ENST00000482192 ACSF2Q96CM8 615 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-213ENST00000482192 SUSD3Q96L08 255 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 SPATA32Q96LK8 384 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 C7orf25Q9BPX7 421 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 LRFN3Q9BTN0 628 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 IKZF4Q9H2S9 585 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 ASB7Q9H672 318 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms