RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 ZCWPW2Q504Y3 356 aa18.86■□□□□ 0.61
DDR1-243ENST00000482050 COBLL1Q53SF7 1204 aa18.86■□□□□ 0.61
DDR1-243ENST00000482050 SPATA1Q5VX52 437 aa18.86■□□□□ 0.61
DDR1-243ENST00000482050 DCLRE1AQ6PJP8 1040 aa18.86■□□□□ 0.61
DDR1-243ENST00000482050 MAFAQ8NHW3 353 aaPredicted RBP18.86■□□□□ 0.61
DDR1-243ENST00000482050 CCDC127Q96BQ5 260 aa18.86■□□□□ 0.61
DDR1-243ENST00000482050 DDX27Q96GQ7 796 aaKnown RBP18.86■□□□□ 0.61
DDR1-243ENST00000482050 LMCD1Q9NZU5 365 aa18.86■□□□□ 0.61
DDR1-243ENST00000482050 DERAQ9Y315 318 aa18.86■□□□□ 0.61
DDR1-243ENST00000482050 C2CD2Q9Y426 696 aa18.86■□□□□ 0.61
DDR1-243ENST00000482050 PRRC2BQ5JSZ5 2229 aaKnown RBP18.86■□□□□ 0.61
DDR1-243ENST00000482050 PTPRJQ12913 1337 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 PPP1R3GB7ZBB8 358 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 C2CD2LO14523 706 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 PPEF2O14830 753 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 DLATP10515 647 aaKnown RBP18.85■□□□□ 0.61
DDR1-243ENST00000482050 CYP3A5P20815 502 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 RPL9P32969 192 aaKnown RBP18.85■□□□□ 0.61
DDR1-243ENST00000482050 BRCC3P46736 316 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 TIGD5Q53EQ6 642 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 TCEAL5Q5H9L2 206 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 ANKRD40Q6AI12 368 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 ADGRD2Q7Z7M1 963 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 RBM23Q86U06 439 aaKnown RBP18.85■□□□□ 0.61
DDR1-243ENST00000482050 SLC9A9Q8IVB4 645 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 TSPAN18Q96SJ8 248 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 POP1Q99575 1024 aaKnown RBP18.85■□□□□ 0.61
DDR1-243ENST00000482050 TSG101Q99816 390 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 ZBP1Q9H171 429 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 NSUN3Q9H649 340 aaKnown RBP18.85■□□□□ 0.61
DDR1-243ENST00000482050 DPP3Q9NY33 737 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 CTNND2Q9UQB3 1225 aa18.85■□□□□ 0.61
DDR1-243ENST00000482050 SF3B1O75533 1304 aaKnown RBP eCLIP18.84■□□□□ 0.61
DDR1-243ENST00000482050 HIDE1A8MVS5 230 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 PSMA7O14818 248 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 FSCN2O14926 492 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 CXCL14O95715 111 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 SOD2P04179 222 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 ADAM9Q13443 819 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 SKIV2LQ15477 1246 aaKnown RBP18.84■□□□□ 0.61
DDR1-243ENST00000482050 FAM171A1Q5VUB5 890 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 CENPPQ6IPU0 288 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 CD300LGQ6UXG3 332 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 TRIML1Q8N9V2 468 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 NELFBQ8WX92 580 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 FNBP1Q96RU3 617 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 HERC2P3Q9BVR0 1158 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 MTMR12Q9C0I1 747 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 FRMD4BQ9Y2L6 1034 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 NUB1Q9Y5A7 615 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 ATG2AQ2TAZ0 1938 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 MYO7AQ13402 2215 aa18.84■□□□□ 0.61
DDR1-243ENST00000482050 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.83■□□□□ 0.6
DDR1-243ENST00000482050 TMEM189-UBE2V1I3L0A0 370 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 TMEM191BP0C7N4 346 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 CTSAP10619 480 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 TNNI1P19237 187 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 CCNE1P24864 410 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 RPL13P26373 211 aaKnown RBP18.83■□□□□ 0.6
DDR1-243ENST00000482050 LRPAP1P30533 357 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 GTF2F1P35269 517 aaKnown RBP eCLIP18.83■□□□□ 0.68e-7■■■■□ 24.7
DDR1-243ENST00000482050 STX17P56962 302 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 SMC1AQ14683 1233 aaKnown RBP18.83■□□□□ 0.6
DDR1-243ENST00000482050 PSMD6Q15008 389 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 SURF1Q15526 300 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 NFIL3Q16649 462 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 EDRF1Q3B7T1 1238 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 C9orf57Q5W0N0 161 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 KIAA1841Q6NSI8 718 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 CEP57Q86XR8 500 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 OR5B17Q8NGF7 314 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 PLEKHO2Q8TD55 490 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 DHTKD1Q96HY7 919 aaPredicted RBP18.83■□□□□ 0.6
DDR1-243ENST00000482050 MFSD14AQ96MC6 490 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 IGFLR1Q9H665 355 aa18.83■□□□□ 0.6
DDR1-243ENST00000482050 NGRNQ9NPE2 291 aaKnown RBP18.83■□□□□ 0.6
DDR1-243ENST00000482050 PER2O15055 1255 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 AKAP3O75969 853 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 EFEMP2O95967 443 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 URODP06132 367 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 PPP1R2P41236 205 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 NRIP1P48552 1158 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 GLUD2P49448 558 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 MYBPC2Q14324 1141 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 BMS1Q14692 1282 aaKnown RBP18.82■□□□□ 0.6
DDR1-243ENST00000482050 PTPN14Q15678 1187 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 SCARA3Q6AZY7 606 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 NT5DC4Q86YG4 428 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 RNF168Q8IYW5 571 aaPredicted RBP18.82■□□□□ 0.6
DDR1-243ENST00000482050 CACTINQ8WUQ7 758 aaKnown RBP18.82■□□□□ 0.6
DDR1-243ENST00000482050 ANKRD36BP1Q96IX9 119 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 CGRRF1Q99675 332 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 GZF1Q9H116 711 aaPredicted RBP18.82■□□□□ 0.6
DDR1-243ENST00000482050 TLE6Q9H808 572 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 INTS13Q9NVM9 706 aa18.82■□□□□ 0.6
DDR1-243ENST00000482050 C2orf71A6NGG8 1288 aa18.81■□□□□ 0.6
DDR1-243ENST00000482050 CETN3O15182 167 aa18.81■□□□□ 0.6
DDR1-243ENST00000482050 TNNC2P02585 160 aa18.81■□□□□ 0.6
DDR1-243ENST00000482050 ITGB3P05106 788 aa18.81■□□□□ 0.6
DDR1-243ENST00000482050 KRT19P08727 400 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms