RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 C8orf74Q6P047 294 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 NOP9Q86U38 636 aaKnown RBP16.91■□□□□ 0.3
RXRA-202ENST00000481739 RHPN2Q8IUC4 686 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 ZNF516Q92618 1163 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 ACO2Q99798 780 aaKnown RBP16.91■□□□□ 0.3
RXRA-202ENST00000481739 ARID3AQ99856 593 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 IMPG2Q9BZV3 1241 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 THAP2Q9H0W7 228 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 PDE11AQ9HCR9 933 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 TTC7AQ9ULT0 858 aaPredicted RBP16.91■□□□□ 0.3
RXRA-202ENST00000481739 PCDHB2Q9Y5E7 798 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 CNTNAP2Q9UHC6 1331 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 TMCO5BA8MYB1 307 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 MIF4GDA9UHW6 222 aaKnown RBP16.91■□□□□ 0.3
RXRA-202ENST00000481739 PGRMC1O00264 195 aaKnown RBP16.91■□□□□ 0.3
RXRA-202ENST00000481739 ACKR2O00590 384 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 PGK1P00558 417 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 HSPA6P17066 643 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 PSEN2P49810 448 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 FMO1Q01740 532 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 POU5F1Q01860 360 aaKnown RBP16.91■□□□□ 0.3
RXRA-202ENST00000481739 GLIPR1L2Q4G1C9 344 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 TSHZ1Q6ZSZ6 1077 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 SLC47A2Q86VL8 602 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 USP38Q8NB14 1042 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 PPP1R13LQ8WUF5 828 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 KAT2BQ92831 832 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 TRIM11Q96F44 468 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 HAPLN2Q9GZV7 340 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 FZD8Q9H461 694 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 VIPAS39Q9H9C1 493 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 SETD4Q9NVD3 440 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 UVRAGQ9P2Y5 699 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 GTF3C4Q9UKN8 822 aa16.91■□□□□ 0.3
RXRA-202ENST00000481739 MYADML2A6NDP7 307 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 CCDC188H7C350 402 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 BUB1BO60566 1050 aaPredicted RBP16.9■□□□□ 0.3
RXRA-202ENST00000481739 F2P00734 622 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 CHRNB2P17787 502 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 TMOD1P28289 359 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 GJA9P57773 515 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 CBX1P83916 185 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 MTHFD1LQ6UB35 978 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 IFNLR1Q8IU57 520 aaPredicted RBP16.9■□□□□ 0.3
RXRA-202ENST00000481739 RASGEF1CQ8N431 466 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 ZBTB45Q96K62 511 aaPredicted RBP16.9■□□□□ 0.3
RXRA-202ENST00000481739 NAP1L3Q99457 506 aaPredicted RBP16.9■□□□□ 0.3
RXRA-202ENST00000481739 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.9■□□□□ 0.32e-6■■□□□ 13.1
RXRA-202ENST00000481739 TCHPQ9BT92 498 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 TAS2R14Q9NYV8 317 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 STIM2Q9P246 746 aa16.9■□□□□ 0.3
RXRA-202ENST00000481739 RRN3P2A6NIE6 340 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 FAM189A1O60320 539 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 SMIM10L2AP0DMW4 78 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 SMIM10L2BP0DMW5 78 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 PROZP22891 400 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 PHKA2P46019 1235 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 PTENP60484 403 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 PPP2R5EQ16537 467 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 FAM187BQ17R55 369 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 MPZL3Q6UWV2 235 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 TRIM72Q6ZMU5 477 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 PALB2Q86YC2 1186 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 PXYLP1Q8TE99 480 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 DDX1Q92499 740 aaKnown RBP16.89■□□□□ 0.29
RXRA-202ENST00000481739 TATDN2Q93075 761 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 ZNF668Q96K58 619 aaPredicted RBP16.89■□□□□ 0.29
RXRA-202ENST00000481739 NLRP4Q96MN2 994 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 RPS6KC1Q96S38 1066 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 KATNAL1Q9BW62 490 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 CARD9Q9H257 536 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 OSGEPQ9NPF4 335 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 XPNPEP3Q9NQH7 507 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 RBM12Q9NTZ6 932 aaKnown RBP16.89■□□□□ 0.29
RXRA-202ENST00000481739 PRMT7Q9NVM4 692 aaPredicted RBP16.89■□□□□ 0.29
RXRA-202ENST00000481739 CTTNBP2NLQ9P2B4 639 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 TMEM59LQ9UK28 342 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 PACSIN2Q9UNF0 486 aaPredicted RBP16.89■□□□□ 0.29
RXRA-202ENST00000481739 AKT3Q9Y243 479 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 TRIM17Q9Y577 477 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 ZEB2O60315 1214 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 SASH3O75995 380 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 GJB1P08034 283 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 MYBL1P10243 752 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 KRT5P13647 590 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 FAM193AP78312 1265 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 CUL2Q13617 745 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 KYAT1Q16773 422 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 CCNI2Q6ZMN8 369 aaPredicted RBP16.89■□□□□ 0.29
RXRA-202ENST00000481739 CNTN6Q9UQ52 1028 aa16.89■□□□□ 0.29
RXRA-202ENST00000481739 CENPFP49454 3210 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 ABLIM1O14639 778 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 KPNA6O60684 536 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 PHACTR2O75167 634 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 VNN1O95497 513 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 CYP1A2P05177 515 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 EDN1P05305 212 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 PRMT2P55345 433 aa16.88■□□□□ 0.29
RXRA-202ENST00000481739 PURAQ00577 322 aaKnown RBP16.88■□□□□ 0.29
RXRA-202ENST00000481739 ACAD10Q6JQN1 1059 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms