RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 NNTQ13423 1086 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 PRAMEF18Q5VWM3 479 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 KCTD16Q68DU8 428 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 NOP9Q86U38 636 aaKnown RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 TXNRD3Q86VQ6 643 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 KCNB2Q92953 911 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 TUBE1Q9UJT0 475 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 GNGT2O14610 69 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 ODC1P11926 461 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 NR1D1P20393 614 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 COPS2P61201 443 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 NOP14P78316 857 aaKnown RBP9.98□□□□□ -0.81
GARNL3-216ENST00000481242 MYBPC2Q14324 1141 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 SUGP1Q8IWZ8 645 aaKnown RBP9.98□□□□□ -0.81
GARNL3-216ENST00000481242 DCUN1D1Q96GG9 259 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 IDI2Q9BXS1 227 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 TRIM15Q9C019 465 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 MAD2L2Q9UI95 211 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 CTIFO43310 598 aaKnown RBP9.98□□□□□ -0.81
GARNL3-216ENST00000481242 PPFIA2O75334 1257 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 EGFRP00533 1210 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 HLA-DRAP01903 254 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 UCHL3P15374 230 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 GARTP22102 1010 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 AP1B1Q10567 949 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 CCDC144BQ3MJ40 725 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 OR6P1Q8NGX9 317 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 ZKSCAN4Q969J2 545 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-216ENST00000481242 RMDN1Q96DB5 314 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 TRIM55Q9BYV6 548 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 POLD4Q9HCU8 107 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 ABCB6Q9NP58 842 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 DSEQ9UL01 958 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 SH3BP1Q9Y3L3 701 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 ITSN1Q15811 1721 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 A0A1B0GTH6 734 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 POLRMTO00411 1230 aaKnown RBP9.98□□□□□ -0.81
GARNL3-216ENST00000481242 ZC3H11AO75152 810 aaKnown RBP eCLIP9.98□□□□□ -0.81
GARNL3-216ENST00000481242 GTF2H1P32780 548 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 ARID5BQ14865 1188 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 SDE2Q6IQ49 451 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 METTL7BQ6UX53 244 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 ACAD11Q709F0 780 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 SYN2Q92777 582 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-216ENST00000481242 USP13Q92995 863 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-216ENST00000481242 SNF8Q96H20 258 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 FRMD8Q9BZ67 464 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-216ENST00000481242 MRGBPQ9NV56 204 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 NOVA2Q9UNW9 492 aaKnown RBP9.98□□□□□ -0.81
GARNL3-216ENST00000481242 DCTN3O75935 186 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 MYO1DO94832 1006 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 ACSL3O95573 720 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 BAG2O95816 211 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 KRT14P02533 472 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 LCP1P13796 627 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 OR1G1P47890 313 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 RCN2Q14257 317 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 TAF11Q15544 211 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 TBCCQ15814 346 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 PCNX4Q63HM2 1172 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 TTC19Q6DKK2 380 aaPredicted RBP9.98□□□□□ -0.81
GARNL3-216ENST00000481242 TBK1Q9UHD2 729 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 TRIM33Q9UPN9 1127 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 ARHGAP23Q9P227 1491 aa9.98□□□□□ -0.81
GARNL3-216ENST00000481242 MAPK13O15264 365 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 KDM1AO60341 852 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 FAM200BP0CF97 657 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 SULT1E1P49888 294 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 NFIAQ12857 509 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 GTF2H3Q13889 308 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 SNX19Q92543 992 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 VTA1Q9NP79 307 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 CFAP99D6REC4 459 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 MSH4O15457 936 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 VCAM1P19320 739 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 CASP2P42575 452 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 HARS2P49590 506 aaKnown RBP9.97□□□□□ -0.81
GARNL3-216ENST00000481242 TMPRSS15P98073 1019 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 PPATQ06203 517 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 GPS1Q13098 491 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 MTA1Q13330 715 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 PDK1Q15118 436 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 NIPA1Q7RTP0 329 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 ACER1Q8TDN7 264 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 SCFD1Q8WVM8 642 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 SPATC1LQ9H0A9 340 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 RSAD1Q9HA92 442 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.97□□□□□ -0.81
GARNL3-216ENST00000481242 NFU1Q9UMS0 254 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 ADGRB1O14514 1584 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 RAB27AP51159 221 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 BOLA3Q53S33 107 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 HSP90AA5PQ58FG0 334 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 TAF2Q6P1X5 1199 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 PPWD1Q96BP3 646 aaKnown RBP9.97□□□□□ -0.81
GARNL3-216ENST00000481242 HPDLQ96IR7 371 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 FBXO28Q9NVF7 368 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 NSMCE4AQ9NXX6 385 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 KANSL3Q9P2N6 904 aa9.97□□□□□ -0.81
GARNL3-216ENST00000481242 INTUQ9ULD6 942 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms