RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 DUSP9Q99956 384 aaKnown RBP20.46■□□□□ 0.87
CCM2-214ENST00000481194 ZBTB24O43167 697 aaPredicted RBP20.45■□□□□ 0.86
CCM2-214ENST00000481194 RIPK3Q9Y572 518 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 MAST2Q6P0Q8 1798 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 CARNS1A5YM72 827 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 STAMBPO95630 424 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 YY1P25490 414 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 PIGHQ14442 188 aaPredicted RBP20.45■□□□□ 0.86
CCM2-214ENST00000481194 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.45■□□□□ 0.86
CCM2-214ENST00000481194 ZNF518BQ9C0D4 1074 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 AAASQ9NRG9 546 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 CXCR5P32302 372 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 NCKAP1LP55160 1127 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 CDO1Q16878 200 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 TSPAN18Q96SJ8 248 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 LBHD1Q9BQE6 289 aaPredicted RBP20.45■□□□□ 0.86
CCM2-214ENST00000481194 CYP2C19P33261 490 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 GUCY2FP51841 1108 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 GALCP54803 685 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 EFHC2Q5JST6 749 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 LRRC31Q6UY01 552 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 CDKL2Q92772 493 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 KCNF1Q9H3M0 494 aa20.45■□□□□ 0.86
CCM2-214ENST00000481194 KRT3P12035 628 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 PRMT2P55345 433 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 ITKQ08881 620 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 ZNF467Q7Z7K2 595 aaPredicted RBP20.44■□□□□ 0.86
CCM2-214ENST00000481194 MICAL1Q8TDZ2 1067 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 KANSL3Q9P2N6 904 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 ANAPC5Q9UJX4 755 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 BCORQ6W2J9 1755 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 MYH14Q7Z406 1995 aaKnown RBP20.44■□□□□ 0.86
CCM2-214ENST00000481194 ARHGAP25P42331 645 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 CAV1Q03135 178 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 KRT71Q3SY84 523 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 ATP2A3Q93084 1043 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 ZNF214Q9UL59 606 aaPredicted RBP20.44■□□□□ 0.86
CCM2-214ENST00000481194 IGLV3-22A0A075B6J6 115 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 GNL1P36915 607 aaPredicted RBP20.44■□□□□ 0.86
CCM2-214ENST00000481194 PCGF5Q86SE9 256 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 TEPSINQ96N21 525 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 PTPN22Q9Y2R2 807 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 TIAM2Q8IVF5 1701 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 ZBED1O96006 694 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 KRT10P13645 584 aa20.44■□□□□ 0.86
CCM2-214ENST00000481194 KLK7P49862 253 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 CCNYQ8ND76 341 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 SPATA20Q8TB22 786 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 DNAJB3Q8WWF6 145 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 TRIM17Q9Y577 477 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 PMS1P54277 932 aaKnown RBP20.43■□□□□ 0.86
CCM2-214ENST00000481194 OSMRQ99650 979 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 MTMR12Q9C0I1 747 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 EPB41L5Q9HCM4 733 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 H3BRJ5 948 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 H7C4K7 107 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 ATP9AO75110 1047 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 VDRP11473 427 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 KCNA2P16389 499 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 CHRNA3P32297 505 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 RRP1BQ14684 758 aaKnown RBP20.43■□□□□ 0.86
CCM2-214ENST00000481194 BTBD8Q5XKL5 378 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 MED4Q9NPJ6 270 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 RPTORQ8N122 1335 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 RGS16O15492 202 aaPredicted RBP20.43■□□□□ 0.86
CCM2-214ENST00000481194 VPS41P49754 854 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 CDR2Q01850 454 aa20.43■□□□□ 0.86
CCM2-214ENST00000481194 NPY5RQ15761 445 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 ATRIPQ8WXE1 791 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 CPB2Q96IY4 423 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 PURBQ96QR8 312 aaKnown RBP20.42■□□□□ 0.86
CCM2-214ENST00000481194 SMIM10L2AP0DMW4 78 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 SMIM10L2BP0DMW5 78 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 GLRA2P23416 452 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 DYNLT1P63172 113 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 E4F1Q66K89 784 aaPredicted RBP20.42■□□□□ 0.86
CCM2-214ENST00000481194 MTHFD1LQ6UB35 978 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 SLITRK6Q9H5Y7 841 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 TNFSF13BQ9Y275 285 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 CCDC151A5D8V7 595 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 LSM8O95777 96 aaKnown RBP20.42■□□□□ 0.86
CCM2-214ENST00000481194 NFIL3Q16649 462 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 SLC35G2Q8TBE7 412 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 GPR20Q99678 358 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 DDX50Q9BQ39 737 aaKnown RBP20.42■□□□□ 0.86
CCM2-214ENST00000481194 APOEP02649 317 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 PAX3P23760 479 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 MTF1Q14872 753 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 PTGISQ16647 500 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 RCOR2Q8IZ40 523 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 TRPV6Q9H1D0 765 aa20.42■□□□□ 0.86
CCM2-214ENST00000481194 LRRC10BA6NIK2 292 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 GOLGA8CPA6NN73 597 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 KRT15P19012 456 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 ACAD10Q6JQN1 1059 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 RAD9BQ6WBX8 426 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 ASAP3Q8TDY4 903 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 GNRH1P01148 92 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 GARSP41250 739 aaKnown RBP20.41■□□□□ 0.86
CCM2-214ENST00000481194 NOVP48745 357 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms