RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 BAG4O95429 457 aaKnown RBP11.9□□□□□ -0.5
CCDC58-205ENST00000479899 LIG1P18858 919 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 GLRA2P23416 452 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 VARSP26640 1264 aaKnown RBP11.9□□□□□ -0.5
CCDC58-205ENST00000479899 EVCP57679 992 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 STARD6P59095 220 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 CSTF1Q05048 431 aaKnown RBP11.9□□□□□ -0.5
CCDC58-205ENST00000479899 TUSC3Q13454 348 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 PCBP1Q15365 356 aaKnown RBP eCLIP11.9□□□□□ -0.5
CCDC58-205ENST00000479899 EARS2Q5JPH6 523 aaKnown RBP11.9□□□□□ -0.5
CCDC58-205ENST00000479899 PPP4R3AQ6IN85 833 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 TSSK4Q6SA08 328 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 MTSS1LQ765P7 747 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 MAML2Q8IZL2 1156 aaPredicted RBP11.9□□□□□ -0.5
CCDC58-205ENST00000479899 FOXJ1Q92949 421 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 DOCK6Q96HP0 2047 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 EIF2AK1Q9BQI3 630 aaKnown RBP11.9□□□□□ -0.5
CCDC58-205ENST00000479899 PHF20Q9BVI0 1012 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 GPRC5CQ9NQ84 441 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 HCFC1R1Q9NWW0 138 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 SNTG2Q9NY99 539 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 CYP46A1Q9Y6A2 500 aa11.9□□□□□ -0.5
CCDC58-205ENST00000479899 ZFP37Q9Y6Q3 630 aaPredicted RBP11.9□□□□□ -0.5
CCDC58-205ENST00000479899 FAM170BA6NMN3 283 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 TBX3O15119 743 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 XYLBO75191 536 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 DGAT1O75907 488 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 SLITRK3O94933 977 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 XBP1P17861 261 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 PRKCQQ04759 706 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 SPIRE1Q08AE8 756 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 AGERQ15109 404 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 SLC44A4Q53GD3 710 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 TPRG1Q6ZUI0 275 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 SLFN12Q8IYM2 578 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 CYP4X1Q8N118 509 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 SUMF1Q8NBK3 374 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 LNX1Q8TBB1 728 aaPredicted RBP11.89□□□□□ -0.51
CCDC58-205ENST00000479899 PIGOQ8TEQ8 1089 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 NAP1L4Q99733 375 aaKnown RBP11.89□□□□□ -0.51
CCDC58-205ENST00000479899 CLSTN3Q9BQT9 956 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 TTPALQ9BTX7 342 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 LTB4R2Q9NPC1 389 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 USP18Q9UMW8 372 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 VWA8A3KMH1 1905 aa11.89□□□□□ -0.51
CCDC58-205ENST00000479899 CDKL5O76039 1030 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 RECQL4O94761 1208 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 REC8O95072 547 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 PAPLNO95428 1278 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 HNRNPA1P09651 372 aaKnown RBP eCLIP11.88□□□□□ -0.51
CCDC58-205ENST00000479899 TARSP26639 723 aaKnown RBP11.88□□□□□ -0.51
CCDC58-205ENST00000479899 ARL2P36404 184 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 RARRES1P49788 294 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 SCRN1Q12765 414 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 NR5A1Q13285 461 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 CALCRLQ16602 461 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 PABPC1LQ4VXU2 614 aaKnown RBP11.88□□□□□ -0.51
CCDC58-205ENST00000479899 GLRA4Q5JXX5 417 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 ZBTB8OSQ8IWT0 167 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 NPAS3Q8IXF0 933 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 SNIP1Q8TAD8 396 aaKnown RBP11.88□□□□□ -0.51
CCDC58-205ENST00000479899 ATRIPQ8WXE1 791 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 PIK3R5Q8WYR1 880 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 MCRS1Q96EZ8 462 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 ZNF274Q96GC6 653 aaPredicted RBP11.88□□□□□ -0.51
CCDC58-205ENST00000479899 CNTNAP3BQ96NU0 1288 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 CNTNAP3Q9BZ76 1288 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 ZMYND15Q9H091 742 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 CXCL16Q9H2A7 254 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 TOR4AQ9NXH8 423 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 DLL3Q9NYJ7 618 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 SMG5Q9UPR3 1016 aaKnown RBP11.88□□□□□ -0.51
CCDC58-205ENST00000479899 USP20Q9Y2K6 914 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 GPSM3Q9Y4H4 160 aa11.88□□□□□ -0.51
CCDC58-205ENST00000479899 EP300Q09472 2414 aaPredicted RBP11.88□□□□□ -0.51
CCDC58-205ENST00000479899 A0A1B0GUA9 196 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 PTGESO14684 152 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 SIAH2O43255 324 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 C1RP00736 705 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 OR1D2P34982 312 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 KRT2P35908 639 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 TXKP42681 527 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 PFKPQ01813 784 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 AXDND1Q5T1B0 1012 aaPredicted RBP11.87□□□□□ -0.51
CCDC58-205ENST00000479899 NOSTRINQ8IVI9 506 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 GPR65Q8IYL9 337 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 FAM177A1Q8N128 213 aaPredicted RBP11.87□□□□□ -0.51
CCDC58-205ENST00000479899 DDX23Q9BUQ8 820 aaKnown RBP11.87□□□□□ -0.51
CCDC58-205ENST00000479899 PDZD7Q9H5P4 517 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 ANKEF1Q9NU02 776 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 PDRG1Q9NUG6 133 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 PRMT7Q9NVM4 692 aaPredicted RBP11.87□□□□□ -0.51
CCDC58-205ENST00000479899 DNMT3BQ9UBC3 853 aaKnown RBP11.87□□□□□ -0.51
CCDC58-205ENST00000479899 FBXO4Q9UKT5 387 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 PCDHA12Q9UN75 941 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 GDAQ9Y2T3 454 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 MRPS23Q9Y3D9 190 aaKnown RBP11.87□□□□□ -0.51
CCDC58-205ENST00000479899 CDY1Q9Y6F8 540 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 ZMYM2Q9UBW7 1377 aa11.87□□□□□ -0.51
CCDC58-205ENST00000479899 I3L4J1 428 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms