RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 C1QTNF9BB2RNN3 333 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 TSPAN1O60635 241 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 DKC1O60832 514 aaKnown RBP eCLIP17.15■□□□□ 0.34
HDLBP-238ENST00000479894 KCNK5O95279 499 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 F13A1P00488 732 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 RHOP08100 348 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 C1QTNF9P0C862 333 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 FCARP24071 287 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 HOXA6P31267 233 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 RFC5P40937 340 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 ELAVL2Q12926 359 aaKnown RBP17.15■□□□□ 0.34
HDLBP-238ENST00000479894 FAM171A1Q5VUB5 890 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 PLA2G4FQ68DD2 849 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 FERMT3Q86UX7 667 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 MAP4K3Q8IVH8 894 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 RNF149Q8NC42 400 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 TCP11Q8WWU5 503 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 MSANTD3Q96H12 275 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 RAB34Q9BZG1 259 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 TRIM6Q9C030 488 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-238ENST00000479894 ZFP14Q9HCL3 533 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 CFAP45Q9UL16 551 aa17.15■□□□□ 0.34
HDLBP-238ENST00000479894 K7ESF4 209 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 MICAL2O94851 1124 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 ATP2B1P20020 1258 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 RESTQ13127 1097 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 PTGDRQ13258 359 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 TUSC3Q13454 348 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 LRRC32Q14392 662 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 GAS6Q14393 721 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 CALCRLQ16602 461 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 STPG1Q5TH74 334 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 CEP68Q76N32 757 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 CEP57Q86XR8 500 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 IFNLR1Q8IU57 520 aaPredicted RBP17.14■□□□□ 0.33
HDLBP-238ENST00000479894 ZNF334Q9HCZ1 680 aaPredicted RBP17.14■□□□□ 0.33
HDLBP-238ENST00000479894 CHMP5Q9NZZ3 219 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 STK24Q9Y6E0 443 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 PIAS3Q9Y6X2 628 aa17.14■□□□□ 0.33
HDLBP-238ENST00000479894 EML5Q05BV3 1969 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 TRIP11Q15643 1979 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 MCM7P33993 719 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 PTENP60484 403 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 POU5F1BQ06416 359 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 SRSF5Q13243 272 aaKnown RBP17.13■□□□□ 0.33
HDLBP-238ENST00000479894 SF3A2Q15428 464 aaKnown RBP17.13■□□□□ 0.33
HDLBP-238ENST00000479894 SLC5A9Q2M3M2 681 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 EARS2Q5JPH6 523 aaKnown RBP17.13■□□□□ 0.33
HDLBP-238ENST00000479894 DEPDC1BQ8WUY9 529 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 GJA10Q969M2 543 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 TMEM143Q96AN5 459 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 CPB2Q96IY4 423 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 CEP170P1Q96L14 293 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 APOL6Q9BWW8 343 aa17.13■□□□□ 0.33
HDLBP-238ENST00000479894 NXF3Q9H4D5 531 aaKnown RBP17.13■□□□□ 0.33
HDLBP-238ENST00000479894 LAMA1P25391 3075 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 ADAM12O43184 909 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 EPN2O95208 641 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 TDP2O95551 362 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 CEBPBP17676 345 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 PTPN2P17706 415 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 PSMC3P17980 439 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 QARSP47897 775 aaKnown RBP17.12■□□□□ 0.33
HDLBP-238ENST00000479894 NPEPPSP55786 919 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 SPIRE1Q08AE8 756 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 GRM2Q14416 872 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 MXD4Q14582 209 aaPredicted RBP17.12■□□□□ 0.33
HDLBP-238ENST00000479894 ARL6IP4Q66PJ3 421 aaKnown RBP17.12■□□□□ 0.33
HDLBP-238ENST00000479894 POTEHQ6S545 545 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.12■□□□□ 0.33
HDLBP-238ENST00000479894 WDR5BQ86VZ2 330 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 RABGGTAQ92696 567 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 COL26A1Q96A83 441 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 TMEM121BQ9BXQ6 578 aaPredicted RBP17.12■□□□□ 0.33
HDLBP-238ENST00000479894 MTRRQ9UBK8 725 aa17.12■□□□□ 0.33
HDLBP-238ENST00000479894 ARHGEF37A1IGU5 675 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 ZNF197O14709 1029 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 KIF4AO95239 1232 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 ARF4P18085 180 aaPredicted RBP17.11■□□□□ 0.33
HDLBP-238ENST00000479894 AKAP5P24588 427 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 OR1D2P34982 312 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 PRPHP41219 470 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 ZNF174Q15697 407 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 FAM78AQ5JUQ0 283 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 ASB16Q96NS5 453 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 PAAF1Q9BRP4 392 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 ARRDC1-AS1Q9H2J1 176 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.11■□□□□ 0.33
HDLBP-238ENST00000479894 RXFP3Q9NSD7 469 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 PCDHA12Q9UN75 941 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 PCDHGA5Q9Y5G8 931 aa17.11■□□□□ 0.33
HDLBP-238ENST00000479894 NUP205Q92621 2012 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 FAM205CA6NFA0 338 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 INO80B-WBP1J3KQ70 363 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 AXIN1O15169 862 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 OR52Z1P0C646 297 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 GDI1P31150 447 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 DDIT3P35638 169 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 RAP1GAPP47736 663 aa17.1■□□□□ 0.33
HDLBP-238ENST00000479894 TOB1P50616 345 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms