RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 KRT37O76014 449 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 MDH1P40925 334 aaKnown RBP15.16■□□□□ 0.02
COL20A1-206ENST00000479501 ARSEP51690 589 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 BCAR1P56945 870 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 EPM2AIP1Q7L775 607 aaPredicted RBP15.16■□□□□ 0.02
COL20A1-206ENST00000479501 ABTB1Q969K4 478 aaPredicted RBP15.16■□□□□ 0.02
COL20A1-206ENST00000479501 KLHL11Q9NVR0 708 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 PCDHAC2Q9Y5I4 1007 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 CHD2O14647 1828 aaKnown RBP15.16■□□□□ 0.02
COL20A1-206ENST00000479501 KIF13AQ9H1H9 1805 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 ZWINTO95229 277 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 SGPL1O95470 568 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 SLC25A27O95847 323 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 GABPAQ06546 454 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 FAM47EQ6ZV65 393 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 ZNF677Q86XU0 584 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 THOC1Q96FV9 657 aaKnown RBP15.16■□□□□ 0.02
COL20A1-206ENST00000479501 ACAP3Q96P50 834 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 OSBPL8Q9BZF1 889 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 AGAP1Q9UPQ3 857 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 LRRIQ3A6PVS8 624 aaPredicted RBP15.16■□□□□ 0.02
COL20A1-206ENST00000479501 MYL3P08590 195 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 CYP3A4P08684 503 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 PDIA2Q13087 525 aaKnown RBP15.16■□□□□ 0.02
COL20A1-206ENST00000479501 RPS6KA2Q15349 733 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 SYDE1Q6ZW31 735 aaPredicted RBP15.16■□□□□ 0.02
COL20A1-206ENST00000479501 RCOR2Q8IZ40 523 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 PXMP2Q9NR77 195 aa15.16■□□□□ 0.02
COL20A1-206ENST00000479501 SPECC1L-ADORA2AF8WAN1 911 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 ITIH2P19823 946 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 CDH6P55285 790 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 CAPRIN2Q6IMN6 1127 aaKnown RBP15.15■□□□□ 0.02
COL20A1-206ENST00000479501 ZBED8Q8IZ13 594 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 CHMP6Q96FZ7 201 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 TRAIPQ9BWF2 469 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 ZBTB39O15060 712 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 GNAT1P11488 350 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 CDR2Q01850 454 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 MEI1Q5TIA1 1274 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 FKBP1CQ5VVH2 108 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 LRRC55Q6ZSA7 311 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 ABI1Q8IZP0 508 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 NKX2-3Q8TAU0 364 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 DBR1Q9UK59 544 aaKnown RBP15.15■□□□□ 0.02
COL20A1-206ENST00000479501 SYNPO2Q9UMS6 1093 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 A8MXQ7 604 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 KYAT1Q16773 422 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 ACAD10Q6JQN1 1059 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 ZC3H18Q86VM9 953 aaKnown RBP15.15■□□□□ 0.02
COL20A1-206ENST00000479501 DNAAF5Q86Y56 855 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 OSGEPQ9NPF4 335 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 WDR35Q9P2L0 1181 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 RAB21Q9UL25 225 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 GZMAP12544 262 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 MX2P20592 715 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 STOML1Q9UBI4 398 aa15.15■□□□□ 0.02
COL20A1-206ENST00000479501 MAGED2Q9UNF1 606 aaPredicted RBP15.15■□□□□ 0.02
COL20A1-206ENST00000479501 A0A0U1RQJ8 604 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 ASAP2O43150 1006 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 PDHA1P08559 390 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 GARTP22102 1010 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
COL20A1-206ENST00000479501 LRRC14Q15048 493 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 ARL13BQ3SXY8 428 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 TAS1R2Q8TE23 839 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 SCFD2Q8WU76 684 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 CASKIN2Q8WXE0 1202 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 TLR10Q9BXR5 811 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 CYP3A7-CYP3A51PA0A087WV96 503 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 ARHGEF37A1IGU5 675 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 EIF3HO15372 352 aaKnown RBP eCLIP15.14■□□□□ 0.01
COL20A1-206ENST00000479501 MAGEB2O15479 319 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 WEE2P0C1S8 567 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 SRGAP2BP0DMP2 458 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 CYP3A7P24462 503 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 MMP14P50281 582 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 IRAK1P51617 712 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.14■□□□□ 0.01
COL20A1-206ENST00000479501 MIIPQ5JXC2 388 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 ATF7IP2Q5U623 682 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 RAPH1Q70E73 1250 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 ZNF384Q8TF68 577 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 MCEEQ96PE7 176 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 ZSWIM1Q9BR11 485 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 NIF3L1Q9GZT8 377 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 ANGPTL2Q9UKU9 493 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 DCTN3O75935 186 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 CYP11B1P15538 503 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 TCF7P36402 384 aaPredicted RBP15.14■□□□□ 0.01
COL20A1-206ENST00000479501 KLHL38Q2WGJ6 581 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 SPOUT1Q5T280 376 aaKnown RBP15.14■□□□□ 0.01
COL20A1-206ENST00000479501 WDR59Q6PJI9 974 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 TRMT10CQ7L0Y3 403 aaKnown RBP15.14■□□□□ 0.01
COL20A1-206ENST00000479501 SLC13A5Q86YT5 568 aaPredicted RBP15.14■□□□□ 0.01
COL20A1-206ENST00000479501 TMC2Q8TDI7 906 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 KCNV2Q8TDN2 545 aa15.14■□□□□ 0.01
COL20A1-206ENST00000479501 POP1Q99575 1024 aaKnown RBP15.14■□□□□ 0.01
COL20A1-206ENST00000479501 FRMPD4Q14CM0 1322 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 A0A0A6YYK5 440 aaPredicted RBP15.13■□□□□ 0.01
COL20A1-206ENST00000479501 SUPT20HL2P0C7V6 817 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms