RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 CCDC127Q96BQ5 260 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 NGLY1Q96IV0 654 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 FAM84AQ96KN4 292 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 CBWD1Q9BRT8 395 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 OXCT2Q9BYC2 517 aaPredicted RBP11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 NSRP1Q9H0G5 558 aaKnown RBP11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 TAOK3Q9H2K8 898 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 DBNDD1Q9H9R9 158 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 CIDEBQ9UHD4 219 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZMYND8Q9ULU4 1186 aaPredicted RBP11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 DIS3Q9Y2L1 958 aaKnown RBP11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 PODXLO00592 558 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 SNX3O60493 162 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 GNAZP19086 355 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 CHKAP35790 457 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZYXQ15942 572 aaKnown RBP11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 EPC2Q52LR7 807 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 SYDE2Q5VT97 1194 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 TAOK1Q7L7X3 1001 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 OTOP1Q7RTM1 612 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 ARHGAP18Q8N392 663 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 DNAJC9Q8WXX5 260 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 ABTB1Q969K4 478 aaPredicted RBP11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 NUP85Q9BW27 656 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 ADAM33Q9BZ11 813 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 FAM192AQ9GZU8 254 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 MTUS1Q9ULD2 1270 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 SH3GLB1Q9Y371 365 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 USH1CQ9Y6N9 552 aa11.75□□□□□ -0.53
LRRFIP1-211ENST00000478958 PDE6CP51160 858 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 MAP7D1Q3KQU3 841 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 RNF207Q6ZRF8 634 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 FAM47EQ6ZV65 393 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZNF564Q8TBZ8 553 aaPredicted RBP11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 PTPRN2Q92932 1015 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 HIC2Q96JB3 615 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 CLMNQ96JQ2 1002 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 FIZ1Q96SL8 496 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 POLR3CQ9BUI4 534 aaPredicted RBP11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZNF219Q9P2Y4 722 aaPredicted RBP11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 NKX1-2Q9UD57 310 aaPredicted RBP11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 FRMPD4Q14CM0 1322 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 MIF4GDA9UHW6 222 aaKnown RBP11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 E7ENQ6 273 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 EIF3DO15371 548 aaKnown RBP eCLIP11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 BBOX1O75936 387 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 WFS1O76024 890 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 RARGP13631 454 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZNF131P52739 623 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 MUM1Q2TAK8 710 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 SGO2Q562F6 1265 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 MOXD1Q6UVY6 613 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 NANOGNBQ7Z5D8 188 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 NOP9Q86U38 636 aaKnown RBP11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 COL23A1Q86Y22 540 aaPredicted RBP11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 SLC13A5Q86YT5 568 aaPredicted RBP11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 OGFOD1Q8N543 542 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 UCMAQ8WVF2 138 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 CCDC17Q96LX7 622 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 SLC4A7Q9Y6M7 1214 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 PASKQ96RG2 1323 aa11.74□□□□□ -0.53
LRRFIP1-211ENST00000478958 UTRNP46939 3433 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 KDM4FA0A1W2PPD8 638 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 ARHGEF35A5YM69 484 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 TMEM150BA6NC51 233 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 FOSP01100 380 aaPredicted RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 GH2P01242 217 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 GJC1P36383 396 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 MLH1P40692 756 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 CACNA2D1P54289 1103 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 OXCT1P55809 520 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 JAG1P78504 1218 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 KRT17Q04695 432 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 KIF22Q14807 665 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 PRUNE1Q86TP1 453 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 DCAF4Q8WV16 495 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 MRRFQ96E11 262 aaKnown RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 MPHOSPH6Q99547 160 aaKnown RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 LXNQ9BS40 222 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 HEMGNQ9BXL5 484 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 PCYOX1Q9UHG3 505 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 USP15Q9Y4E8 981 aaPredicted RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 COL16A1Q07092 1604 aaPredicted RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 IGLV3-22A0A075B6J6 115 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 ARP10275 920 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 BMP3P12645 472 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 CALB2P22676 271 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 CTNNA2P26232 953 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 DRG2P55039 364 aaKnown RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 PHEXP78562 749 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 CETN1Q12798 172 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 LLGL2Q6P1M3 1020 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 SRRM1Q8IYB3 904 aaKnown RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 LMO3Q8TAP4 145 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 CHST7Q9NS84 486 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 PARP2Q9UGN5 583 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 PCDHA3Q9Y5H8 950 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 LSM1O15116 133 aaKnown RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 KRT38O76015 456 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms