RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 YWHAGP61981 247 aaKnown RBP eCLIP10.38□□□□□ -0.75
CMC1-209ENST00000477739 ELF3P78545 371 aaPredicted RBP10.38□□□□□ -0.75
CMC1-209ENST00000477739 PDIA2Q13087 525 aaKnown RBP10.38□□□□□ -0.75
CMC1-209ENST00000477739 SPATA21Q7Z572 469 aa10.38□□□□□ -0.75
CMC1-209ENST00000477739 FMNL3Q8IVF7 1028 aa10.38□□□□□ -0.75
CMC1-209ENST00000477739 KIFAP3Q92845 792 aa10.38□□□□□ -0.75
CMC1-209ENST00000477739 SLC13A1Q9BZW2 595 aa10.38□□□□□ -0.75
CMC1-209ENST00000477739 UBN1Q9NPG3 1134 aa10.38□□□□□ -0.75
CMC1-209ENST00000477739 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.38□□□□□ -0.75
CMC1-209ENST00000477739 IGLV3-22A0A075B6J6 115 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 DDX3YO15523 660 aaKnown RBP10.37□□□□□ -0.75
CMC1-209ENST00000477739 CYP11B1P15538 503 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 TCF4P15884 667 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 CNGA1P29973 690 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 FNTAP49354 379 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 ADCY2Q08462 1091 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 AUHQ13825 339 aaKnown RBP10.37□□□□□ -0.75
CMC1-209ENST00000477739 BRDTQ58F21 947 aaPredicted RBP10.37□□□□□ -0.75
CMC1-209ENST00000477739 FOXR2Q6PJQ5 311 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 BTNL9Q6UXG8 535 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 NLRX1Q86UT6 975 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 EMC1Q8N766 993 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 GLIS1Q8NBF1 620 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 PPP1R14CQ8TAE6 165 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 LRRC8CQ8TDW0 803 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 MXRA8Q9BRK3 442 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 IQCGQ9H095 443 aaKnown RBP10.37□□□□□ -0.75
CMC1-209ENST00000477739 ZCWPW1Q9H0M4 648 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 ZBED4O75132 1171 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 CHRNA3P32297 505 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 CAP2P40123 477 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 FKBP1AP62942 108 aaKnown RBP10.37□□□□□ -0.75
CMC1-209ENST00000477739 EFTUD2Q15029 972 aaKnown RBP eCLIP10.37□□□□□ -0.75
CMC1-209ENST00000477739 IL31Q6EBC2 164 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 CASC4Q6P4E1 433 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 APBB1IPQ7Z5R6 666 aaPredicted RBP10.37□□□□□ -0.75
CMC1-209ENST00000477739 RHOT2Q8IXI1 618 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 CCDC89Q8N998 374 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 HES6Q96HZ4 224 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 FHDC1Q9C0D6 1143 aaPredicted RBP10.37□□□□□ -0.75
CMC1-209ENST00000477739 SEL1LQ9UBV2 794 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 SMCHD1A6NHR9 2005 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 H0YGN5 161 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 EIF3DO15371 548 aaKnown RBP eCLIP10.37□□□□□ -0.75
CMC1-209ENST00000477739 P4HBP07237 508 aaKnown RBP10.37□□□□□ -0.75
CMC1-209ENST00000477739 POTEJP0CG39 1038 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 ITGB5P18084 799 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 SAT1P21673 171 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 RXRBP28702 533 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 CETN2P41208 172 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 HIRAP54198 1017 aaPredicted RBP10.37□□□□□ -0.75
CMC1-209ENST00000477739 RAD23BP54727 409 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 DEFB132Q7Z7B7 95 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 MCF2L2Q86YR7 1114 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 RTKN2Q8IZC4 609 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 VPS52Q8N1B4 723 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 CFAP36Q96G28 342 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 ATXN7L3BQ96GX2 97 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 HERPUD2Q9BSE4 406 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 CARD9Q9H257 536 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 ACTR5Q9H9F9 607 aaPredicted RBP10.37□□□□□ -0.75
CMC1-209ENST00000477739 USP15Q9Y4E8 981 aaPredicted RBP10.37□□□□□ -0.75
CMC1-209ENST00000477739 NFS1Q9Y697 457 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 MAD1L1Q9Y6D9 718 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 RPTORQ8N122 1335 aa10.37□□□□□ -0.75
CMC1-209ENST00000477739 A6NNZ2 444 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 PIK3CDO00329 1044 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 FSBPO95073 299 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 ZBTB7AO95365 584 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 SSTR1P30872 391 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 TUBB8Q3ZCM7 444 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 EPS8L1Q8TE68 723 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 MCUR1Q96AQ8 359 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 KREMEN1Q96MU8 473 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 MCEEQ96PE7 176 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 STMN4Q9H169 189 aaPredicted RBP10.36□□□□□ -0.75
CMC1-209ENST00000477739 ARMCX1Q9P291 453 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 NAALADL1Q9UQQ1 740 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 F7P08709 466 aaPredicted RBP10.36□□□□□ -0.75
CMC1-209ENST00000477739 QARSP47897 775 aaKnown RBP10.36□□□□□ -0.75
CMC1-209ENST00000477739 POLGP54098 1239 aaPredicted RBP10.36□□□□□ -0.75
CMC1-209ENST00000477739 GAD2Q05329 585 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 SPP2Q13103 211 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 SLC15A2Q16348 729 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 MUM1Q2TAK8 710 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 ERMARDQ5T6L9 678 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 ZNF772Q68DY9 489 aaPredicted RBP10.36□□□□□ -0.75
CMC1-209ENST00000477739 DUPD1Q68J44 220 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 ZDHHC24Q6UX98 284 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 SV2AQ7L0J3 742 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 SULF1Q8IWU6 871 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 PALM2Q8IXS6 379 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 SLC25A41Q8N5S1 370 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 PLEKHO2Q8TD55 490 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 CCDC124Q96CT7 223 aaKnown RBP10.36□□□□□ -0.75
CMC1-209ENST00000477739 RILPQ96NA2 401 aa10.36□□□□□ -0.75
CMC1-209ENST00000477739 CNOT10Q9H9A5 744 aaKnown RBP10.36□□□□□ -0.75
CMC1-209ENST00000477739 NPM3O75607 178 aaKnown RBP10.36□□□□□ -0.75
CMC1-209ENST00000477739 VIL1P09327 827 aaKnown RBP10.36□□□□□ -0.75
CMC1-209ENST00000477739 EIF3BP55884 814 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms