RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	KIAA1683	Q9H0B3	1180 aa		5.22	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CCSER2	Q9H7U1	834 aa		5.22	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ZCCHC17	Q9NP64	241 aa	Known RBP	5.22	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	TCP11L1	Q9NUJ3	509 aa		5.22	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	HOXC10	Q9NYD6	342 aa		5.22	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	PNMA2	Q9UL42	364 aa		5.22	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.22	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	FZD1	Q9UP38	647 aa		5.22	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CYP46A1	Q9Y6A2	500 aa		5.22	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	MRVI1	Q9Y6F6	885 aa		5.22	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	WDR46	O15213	610 aa	Known RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	PRC1	O43663	620 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CAPNS1	P04632	268 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SNRPB2	P08579	225 aa	Known RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	EEF2	P13639	858 aa	Known RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TACR2	P21452	398 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	KIF5B	P33176	963 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	HSPA4	P34932	840 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ECI1	P42126	302 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SLC1A4	P43007	532 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	GNAQ	P50148	359 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	HMGCS2	P54868	508 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ANAPC15	P60006	121 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CCNA1	P78396	465 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ADAM9	Q13443	819 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	NECTIN1	Q15223	517 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ACBD5	Q5T8D3	534 aa	Predicted RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MCTP2	Q6DN12	878 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MRM1	Q6IN84	353 aa	Known RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CPLX2	Q6PUV4	134 aa	Known RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ANKRD23	Q86SG2	305 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	FAM160B2	Q86V87	743 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ZC3H18	Q86VM9	953 aa	Known RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289		Q8N1X5	172 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TXNDC5	Q8NBS9	432 aa	Known RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CTCFL	Q8NI51	663 aa	Predicted RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MICAL1	Q8TDZ2	1067 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TRMT2B	Q96GJ1	504 aa	Known RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	JAKMIP1	Q96N16	626 aa	Known RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SSBP3	Q9BWW4	388 aa	Predicted RBP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	C22orf23	Q9BZE7	217 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	DNAJC18	Q9H819	358 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	VCPKMT	Q9H867	229 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MTMR4	Q9NYA4	1195 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ACTR10	Q9NZ32	417 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	AGTPBP1	Q9UPW5	1226 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	INVS	Q9Y283	1065 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SLC45A1	Q9Y2W3	748 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TMX2	Q9Y320	296 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	AFG3L2	Q9Y4W6	797 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TNKS	O95271	1327 aa		5.21	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	FOCAD	Q5VW36	1801 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CCDC196	A0A1B0GTZ2	297 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MROH6	A6NGR9	719 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289		F5H6K3	240 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	PDHX	O00330	501 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	DDX3X	O00571	662 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CYR61	O00622	381 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MEFV	O15553	781 aa	Predicted RBP	5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SUSD5	O60279	629 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	ZBED4	O75132	1171 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	FLOT1	O75955	427 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	FGR	P09769	529 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	LCP1	P13796	627 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CAST	P20810	708 aa	Known RBP	5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	HOXD10	P28358	340 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	COPB2	P35606	906 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TM4SF4	P48230	202 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	GCLC	P48506	637 aa	Predicted RBP	5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	STAT2	P52630	851 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	AKAP17A	Q02040	695 aa	Known RBP	5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	KLRC3	Q07444	240 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	KCNAB2	Q13303	367 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	COG2	Q14746	738 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SV2C	Q496J9	727 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	GPATCH4	Q5T3I0	446 aa	Known RBP	5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	LARP1B	Q659C4	914 aa	Known RBP	5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SLFN13	Q68D06	897 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TBC1D10C	Q8IV04	446 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	NUP133	Q8WUM0	1156 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	DCAF4	Q8WV16	495 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MKL1	Q969V6	931 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CEP95	Q96GE4	821 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	C1orf159	Q96HA4	380 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TMEM169	Q96HH4	297 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SLITRK6	Q9H5Y7	841 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SAGE1	Q9NXZ1	904 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	FEM1B	Q9UK73	627 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	BAZ2A	Q9UIF9	1905 aa	Known RBP	5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	SSC5D	A1L4H1	1573 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	NEDD4	P46934	1319 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	WDR19	Q8NEZ3	1342 aa		5.2	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	LAMB1	P07942	1786 aa		5.19	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	MYH8	P13535	1937 aa		5.19	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	PLIN4	Q96Q06	1357 aa		5.19	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	BTBD19	C9JJ37	291 aa		5.19	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	CPLX1	O14810	134 aa		5.19	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	FOXP2	O15409	715 aa		5.19	□□□□□ -1.58
NSMCE4A-208	ENST00000477289	TADA3	O75528	432 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms