RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 NCBP1Q09161 790 aaKnown RBP15.56■□□□□ 0.08
COL4A6-206ENST00000477085 SPA17Q15506 151 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 KYAT1Q16773 422 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 ALKAL1Q6UXT8 129 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 DNAJC5GQ8N7S2 189 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 C1orf127Q8N9H9 656 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 SLC20A1Q8WUM9 679 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 GLT1D1Q96MS3 346 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 IFIH1Q9BYX4 1025 aaKnown RBP15.56■□□□□ 0.08
COL4A6-206ENST00000477085 TRPV6Q9H1D0 765 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 ASB7Q9H672 318 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 PAK6Q9NQU5 681 aaPredicted RBP15.56■□□□□ 0.08
COL4A6-206ENST00000477085 RNF19AQ9NV58 838 aa15.56■□□□□ 0.08
COL4A6-206ENST00000477085 AKAP5P24588 427 aa15.55■□□□□ 0.08
COL4A6-206ENST00000477085 MAGEA1P43355 309 aa15.55■□□□□ 0.08
COL4A6-206ENST00000477085 GUCY2FP51841 1108 aa15.55■□□□□ 0.08
COL4A6-206ENST00000477085 NOP14P78316 857 aaKnown RBP15.55■□□□□ 0.08
COL4A6-206ENST00000477085 PTK7Q13308 1070 aa15.55■□□□□ 0.08
COL4A6-206ENST00000477085 WDR44Q5JSH3 913 aa15.55■□□□□ 0.08
COL4A6-206ENST00000477085 RSPH3Q86UC2 560 aa15.55■□□□□ 0.08
COL4A6-206ENST00000477085 SLC47A2Q86VL8 602 aa15.55■□□□□ 0.08
COL4A6-206ENST00000477085 PALB2Q86YC2 1186 aa15.55■□□□□ 0.08
COL4A6-206ENST00000477085 ZNF592Q92610 1267 aa15.55■□□□□ 0.08
COL4A6-206ENST00000477085 PACSIN1Q9BY11 444 aa15.55■□□□□ 0.08
COL4A6-206ENST00000477085 ST3GAL5Q9UNP4 418 aa15.55■□□□□ 0.08
COL4A6-206ENST00000477085 TMEM191BP0C7N4 346 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 CHRNB2P17787 502 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 USP8P40818 1118 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 PTPN11Q06124 597 aaPredicted RBP15.54■□□□□ 0.08
COL4A6-206ENST00000477085 CUL2Q13617 745 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.54■□□□□ 0.08
COL4A6-206ENST00000477085 KIAA1328Q86T90 577 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 NOP9Q86U38 636 aaKnown RBP15.54■□□□□ 0.08
COL4A6-206ENST00000477085 GLYCTKQ8IVS8 523 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 ARRDC4Q8NCT1 418 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 SMG8Q8ND04 991 aaKnown RBP15.54■□□□□ 0.08
COL4A6-206ENST00000477085 JAKMIP2Q96AA8 810 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 ANKRD36BP1Q96IX9 119 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 C1orf112Q9NSG2 853 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 DNAI1Q9UI46 699 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 SALL4Q9UJQ4 1053 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 NAGPAQ9UK23 515 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 NOCTQ9UK39 431 aaKnown RBP15.54■□□□□ 0.08
COL4A6-206ENST00000477085 PHF24Q9UPV7 400 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 FRMPD3Q5JV73 1810 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 M0QZ92 97 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 RPS6KA5O75582 802 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 TNNC2P02585 160 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 GNG11P61952 73 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 ZBTB6Q15916 424 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 SGSM1Q2NKQ1 1148 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 ARHGAP29Q52LW3 1261 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 CCDC122Q5T0U0 273 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 TRAF7Q6Q0C0 670 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 ENOSF1Q7L5Y1 443 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 UBR7Q8N806 425 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 EPS8L1Q8TE68 723 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 SNX27Q96L92 541 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 CCDC94Q9BW85 323 aaPredicted RBP15.54■□□□□ 0.08
COL4A6-206ENST00000477085 GUCA1BQ9UMX6 200 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 PAXBP1Q9Y5B6 917 aa15.54■□□□□ 0.08
COL4A6-206ENST00000477085 PJA2O43164 708 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 RECQL4O94761 1208 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 ITGB3P05106 788 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 C1QTNF8P60827 252 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 BMS1Q14692 1282 aaKnown RBP15.53■□□□□ 0.08
COL4A6-206ENST00000477085 TMEM132DQ14C87 1099 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 FBXO47Q5MNV8 452 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 ZNF618Q5T7W0 954 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 DDX1Q92499 740 aaKnown RBP15.53■□□□□ 0.08
COL4A6-206ENST00000477085 DEFB118Q96PH6 123 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 PCDHB18PQ96TA0 734 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 AGPAT1Q99943 283 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 PLEKHA5Q9HAU0 1116 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 STARD7Q9NQZ5 370 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 TAS2R14Q9NYV8 317 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 C2CD2Q9Y426 696 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 IPPQ9Y573 584 aa15.53■□□□□ 0.08
COL4A6-206ENST00000477085 FAM170AA1A519 330 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 IPO7O95373 1038 aaKnown RBP15.52■□□□□ 0.08
COL4A6-206ENST00000477085 CYP11B1P15538 503 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 NFX1Q12986 1120 aaKnown RBP15.52■□□□□ 0.08
COL4A6-206ENST00000477085 TRPC3Q13507 836 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 LPIN1Q14693 890 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 NAB2Q15742 525 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 FAM26DQ5JW98 314 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 ALKBH5Q6P6C2 394 aaKnown RBP15.52■□□□□ 0.08
COL4A6-206ENST00000477085 KIF12Q96FN5 646 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 APOL6Q9BWW8 343 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 ERVK-5Q9HDB9 667 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 KLK14Q9P0G3 267 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 POLIQ9UNA4 740 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 CNTN6Q9UQ52 1028 aa15.52■□□□□ 0.08
COL4A6-206ENST00000477085 MEIS3P2A8K0S8 358 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 KIF2AO00139 706 aaPredicted RBP15.52■□□□□ 0.07
COL4A6-206ENST00000477085 MGEA5O60502 916 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 KRT19P08727 400 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 CCL5P13501 91 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 ANXA13P27216 316 aa15.52■□□□□ 0.07
COL4A6-206ENST00000477085 CD52P31358 61 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms