RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 ZNF197O14709 1029 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 MICAL2O94851 1124 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 EDN1P05305 212 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 PRKCBP05771 671 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 CHRNB1P11230 501 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 XRCC6P12956 609 aaKnown RBP eCLIP18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 GDI1P31150 447 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 ELF1P32519 619 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 BRCC3P46736 316 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 FNTBP49356 437 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 SRSF5Q13243 272 aaKnown RBP18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 MAPK6Q16659 721 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 UPP1Q16831 310 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 C3orf58Q8NDZ4 430 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 BSNDQ8WZ55 320 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 SMARCD2Q92925 531 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 ZSWIM3Q96MP5 696 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 ADPGKQ9BRR6 497 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 GOLGA2P5Q9HBQ8 144 aa18.13■□□□□ 0.49
APOBEC3F-203ENST00000476513 ACKR2O00590 384 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 TRAPPC3O43617 180 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 SEC24AO95486 1093 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 XBP1P17861 261 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 PSMC3P17980 439 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 LIG1P18858 919 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 KCNA4P22459 653 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 TCEAL8Q8IYN2 117 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 MCPH1Q8NEM0 835 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 UROC1Q96N76 676 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 CCDC113Q9H0I3 377 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 C2orf40Q9H1Z8 148 aa18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 TTC12Q9H892 705 aaPredicted RBP18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 CNOT1A5YKK6 2376 aaKnown RBP18.12■□□□□ 0.49
APOBEC3F-203ENST00000476513 DTNBO60941 627 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 ATF2P15336 505 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 ATP2B1P20020 1258 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 CCNE1P24864 410 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 VIPR2P41587 438 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 ARPP19P56211 112 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 CALCRLQ16602 461 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 PDZD4Q76G19 769 aaPredicted RBP18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 SPEM1Q8N4L4 309 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 DEPDC1BQ8WUY9 529 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 CYP4F11Q9HBI6 524 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 ANGPTL2Q9UKU9 493 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 INSL5Q9Y5Q6 135 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 CYP46A1Q9Y6A2 500 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 COL4A2P08572 1712 aa18.11■□□□□ 0.49
APOBEC3F-203ENST00000476513 NCANO14594 1321 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 ZNF263O14978 683 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 MOSPD3O75425 235 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 SPATA31C1P0DKV0 1188 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 CNR2P34972 360 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 TXKP42681 527 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 PTGDRQ13258 359 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 NR5A1Q13285 461 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 DCAF4L1Q3SXM0 396 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 CYP4A22Q5TCH4 519 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 HS6ST3Q8IZP7 471 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 DDX1Q92499 740 aaKnown RBP18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 TRPV4Q9HBA0 871 aa18.1■□□□□ 0.49
APOBEC3F-203ENST00000476513 STK36Q9NRP7 1315 aa18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 SMIM28A0A1B0GU29 152 aa18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 K7ESF4 209 aa18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 ARNTLO00327 626 aa18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 FOXD2O60548 495 aaPredicted RBP18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 CDKL5O76039 1030 aa18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 PAPSS2O95340 614 aaPredicted RBP18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 PMLP29590 882 aa18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 SOX4Q06945 474 aaPredicted RBP18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 SCRN1Q12765 414 aa18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 HEATR6Q6AI08 1181 aaKnown RBP18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 LONP2Q86WA8 852 aa18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 ZSCAN18Q8TBC5 510 aaPredicted RBP18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 TNFRSF25Q93038 417 aa18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 RBM12Q9NTZ6 932 aaKnown RBP18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 CEP72Q9P209 647 aa18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 RALYQ9UKM9 306 aaKnown RBP18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 CFAP47Q6ZTR5 3102 aa18.09■□□□□ 0.49
APOBEC3F-203ENST00000476513 GJA1P17302 382 aa18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 NAMPTP43490 491 aa18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 MLLT6P55198 1093 aaPredicted RBP18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 WDR44Q5JSH3 913 aa18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 N4BP2L1Q5TBK1 243 aaPredicted RBP18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 IL31Q6EBC2 164 aa18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 Q6ZS52 159 aa18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 CATSPER3Q86XQ3 398 aa18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 MFSD6LQ8IWD5 586 aa18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 ELMOD1Q8N336 334 aa18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 FAM160A2Q8N612 972 aaPredicted RBP18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 DEPTORQ8TB45 409 aa18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 FBXL5Q9UKA1 691 aa18.08■□□□□ 0.48
APOBEC3F-203ENST00000476513 HEPACAM2A8MVW5 462 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 H7C4K7 107 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 WNT7AO00755 349 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 SYN3O14994 580 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 NEMFO60524 1076 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 REC8O95072 547 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 KRT2P35908 639 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms