RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 VPS37CA5D8V6 355 aaPredicted RBP7.2□□□□□ -1.26
CLDN4-205ENST00000476494 MAFGO15525 162 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 ADAM12O43184 909 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 CYTH3O43739 400 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 DKK1O94907 266 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 F13A1P00488 732 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 RHOP08100 348 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 CTHP32929 405 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 CSRP3P50461 194 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 GPC3P51654 580 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 CLCN3P51790 818 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 ELF2Q15723 593 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 UVSSAQ2YD98 709 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 PPM1LQ5SGD2 360 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 GALNT17Q6IS24 598 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 C1orf228Q6PIY5 440 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 USP17L6PQ6QN14 398 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 ABHD15Q6UXT9 468 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 TMPRSS7Q7RTY8 843 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 RAB11FIP4Q86YS3 637 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 MFSD6LQ8IWD5 586 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 SRBD1Q8N5C6 995 aaKnown RBP7.2□□□□□ -1.26
CLDN4-205ENST00000476494 CCDC12Q8WUD4 166 aaPredicted RBP7.2□□□□□ -1.26
CLDN4-205ENST00000476494 RRP36Q96EU6 259 aaKnown RBP7.2□□□□□ -1.26
CLDN4-205ENST00000476494 MSANTD3Q96H12 275 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 CDHR1Q96JP9 859 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 ZNF668Q96K58 619 aaPredicted RBP7.2□□□□□ -1.26
CLDN4-205ENST00000476494 RIOX1Q9H6W3 641 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 TRPV4Q9HBA0 871 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 JPH1Q9HDC5 661 aaPredicted RBP7.2□□□□□ -1.26
CLDN4-205ENST00000476494 TMEM74BQ9NUR3 256 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 PKD2L1Q9P0L9 805 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 EBF1Q9UH73 591 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 PRG3Q9Y2Y8 225 aaPredicted RBP7.2□□□□□ -1.26
CLDN4-205ENST00000476494 ZDHHC9Q9Y397 364 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 MRPS23Q9Y3D9 190 aaKnown RBP7.2□□□□□ -1.26
CLDN4-205ENST00000476494 V9GY48 417 aaPredicted RBP7.2□□□□□ -1.26
CLDN4-205ENST00000476494 HELZP42694 1942 aaKnown RBP7.2□□□□□ -1.26
CLDN4-205ENST00000476494 FLNCQ14315 2725 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 ZMYM2Q9UBW7 1377 aa7.2□□□□□ -1.26
CLDN4-205ENST00000476494 TDRD15B5MCY1 1934 aaKnown RBP7.19□□□□□ -1.26
CLDN4-205ENST00000476494 TEX51A0A1B0GUA7 166 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 TRABD2BA6NFA1 517 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 DDX11L8A8MPP1 907 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 SPECC1L-ADORA2AF8WAN1 911 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 PIK3CDO00329 1044 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 CAPN9O14815 690 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 XYLBO75191 536 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 MOSPD3O75425 235 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 MAFO75444 373 aaPredicted RBP7.19□□□□□ -1.26
CLDN4-205ENST00000476494 PLEKHA8P1O95397 391 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 CCNE2O96020 404 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 FTH1P19P0C7X4 201 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 ENGP17813 658 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 VIPR2P41587 438 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 CCR2P41597 374 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 LMAN2Q12907 356 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 MTMR1Q13613 665 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 TRIP6Q15654 476 aaKnown RBP7.19□□□□□ -1.26
CLDN4-205ENST00000476494 PFKFB3Q16875 520 aaPredicted RBP7.19□□□□□ -1.26
CLDN4-205ENST00000476494 SLC23A3Q6PIS1 610 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 PRSS55Q6UWB4 352 aaPredicted RBP7.19□□□□□ -1.26
CLDN4-205ENST00000476494 BRAPQ7Z569 592 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 RALGPS2Q86X27 583 aaPredicted RBP7.19□□□□□ -1.26
CLDN4-205ENST00000476494 MARCH9Q86YJ5 346 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 CCDC60Q8IWA6 550 aaPredicted RBP7.19□□□□□ -1.26
CLDN4-205ENST00000476494 ZNF710Q8N1W2 664 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 DAGLBQ8NCG7 672 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 CCDC148Q8NFR7 591 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 RSPRY1Q96DX4 576 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 TCEAL4Q96EI5 215 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 ZNF396Q96N95 335 aaPredicted RBP7.19□□□□□ -1.26
CLDN4-205ENST00000476494 CAMK1GQ96NX5 476 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 GLT8D2Q9H1C3 349 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 C8orf33Q9H7E9 229 aaPredicted RBP7.19□□□□□ -1.26
CLDN4-205ENST00000476494 BRMS1Q9HCU9 246 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 POLMQ9NP87 494 aaPredicted RBP7.19□□□□□ -1.26
CLDN4-205ENST00000476494 MIOSQ9NXC5 875 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 KANSL3Q9P2N6 904 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 SEC63Q9UGP8 760 aaKnown RBP7.19□□□□□ -1.26
CLDN4-205ENST00000476494 DNMT3LQ9UJW3 386 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 CFAP45Q9UL16 551 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 SRPK3Q9UPE1 567 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 NFASCO94856 1347 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 CACNA1DQ01668 2161 aa7.19□□□□□ -1.26
CLDN4-205ENST00000476494 USP9YO00507 2555 aaPredicted RBP7.18□□□□□ -1.26
CLDN4-205ENST00000476494 PNMA6FA0A0J9YX94 578 aa7.18□□□□□ -1.26
CLDN4-205ENST00000476494 WDR27A2RRH5 827 aa7.18□□□□□ -1.26
CLDN4-205ENST00000476494 SLC38A8A6NNN8 435 aa7.18□□□□□ -1.26
CLDN4-205ENST00000476494 ZNF263O14978 683 aa7.18□□□□□ -1.26
CLDN4-205ENST00000476494 CBFA2T3O75081 653 aa7.18□□□□□ -1.26
CLDN4-205ENST00000476494 GJB3O75712 270 aa7.18□□□□□ -1.26
CLDN4-205ENST00000476494 MICAL2O94851 1124 aa7.18□□□□□ -1.26
CLDN4-205ENST00000476494 BAG4O95429 457 aaKnown RBP7.18□□□□□ -1.26
CLDN4-205ENST00000476494 POMCP01189 267 aa7.18□□□□□ -1.26
CLDN4-205ENST00000476494 SKIP12755 728 aa7.18□□□□□ -1.26
CLDN4-205ENST00000476494 BCKDHBP21953 392 aa7.18□□□□□ -1.26
CLDN4-205ENST00000476494 U2AF2P26368 475 aaKnown RBP eCLIP7.18□□□□□ -1.26
CLDN4-205ENST00000476494 MCM4P33991 863 aa7.18□□□□□ -1.26
CLDN4-205ENST00000476494 FCHO2Q0JRZ9 810 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms