RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 GRID2IPA4D2P6 1211 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 EML1O00423 815 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 CXCL9Q07325 125 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 AMHR2Q16671 573 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 P3H1Q32P28 736 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 RSPH3Q86UC2 560 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 AFAP1L2Q8N4X5 818 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 UBA3Q8TBC4 463 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 TAS1R2Q8TE23 839 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 ZNF473Q8WTR7 871 aaKnown RBP10.19□□□□□ -0.78
CDH23-211ENST00000475158 RNF139Q8WU17 664 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 SGSM3Q96HU1 749 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 FAM84AQ96KN4 292 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 TGS1Q96RS0 853 aaKnown RBP10.19□□□□□ -0.78
CDH23-211ENST00000475158 RBM15Q96T37 977 aaKnown RBP eCLIP10.19□□□□□ -0.78
CDH23-211ENST00000475158 NUF2Q9BZD4 464 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 L1RE1Q9UN81 338 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 NWD1Q149M9 1564 aa10.19□□□□□ -0.78
CDH23-211ENST00000475158 TCP11X1B4DZS4 312 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 ITGA4P13612 1032 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 PDGFRAP16234 1089 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 TBXAS1P24557 533 aaPredicted RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 DEUP1Q05D60 604 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 TFDP2Q14188 446 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 TKFCQ3LXA3 575 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 KCNT1Q5JUK3 1230 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 TRAPPC11Q7Z392 1133 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 SLC51AQ86UW1 340 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 NKX2-3Q8TAU0 364 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 CERKQ8TCT0 537 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 SEPT1Q8WYJ6 367 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 C18orf8Q96DM3 657 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 EHD4Q9H223 541 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 SLIT1O75093 1534 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 EPHB6O15197 1021 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 GTF2H1P32780 548 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 GARSP41250 739 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 SLC15A2Q16348 729 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 SWT1Q5T5J6 900 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 FAXCQ5TGI0 409 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 APOBEC3FQ8IUX4 373 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 PDCD6IPQ8WUM4 868 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 SNRNP27Q8WVK2 155 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 RIT2Q99578 217 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 PRMT1Q99873 361 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 KLC2Q9H0B6 622 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 ETNK1Q9HBU6 452 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 MARCOQ9UEW3 520 aaPredicted RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 TSR3Q9UJK0 312 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 PRRC2BQ5JSZ5 2229 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 SLC16A3O15427 465 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 KRT37O76014 449 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 GNAT1P11488 350 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 KRT10P13645 584 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 HOXA7P31268 230 aaPredicted RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 CASP5P51878 434 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 ACTR2P61160 394 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 AP1B1Q10567 949 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 APOBEC3HQ6NTF7 200 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 METTL23Q86XA0 190 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 TPCN2Q8NHX9 752 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 B4GALNT2Q8NHY0 566 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 FBXO41Q8TF61 875 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 PPWD1Q96BP3 646 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 PPP1R36Q96LQ0 422 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 MOV10L1Q9BXT6 1211 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 OSBPL8Q9BZF1 889 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 IKZF4Q9H2S9 585 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 ASNSD1Q9NWL6 643 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 PNMA3Q9UL41 463 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 PIN4Q9Y237 131 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 SPDYE2BA6NHP3 402 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 ATP9BO43861 1147 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 CALCAP01258 141 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 GLI1P08151 1106 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 SPDYE6P0CI01 402 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 RALAP11233 206 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 CLCN3P51790 818 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 DYNC1I2Q13409 638 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 GPAT2Q6NUI2 795 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 FBXL16Q8N461 479 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 CHMP6Q96FZ7 201 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 PURBQ96QR8 312 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 SMYD3Q9H7B4 428 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 PAPOLBQ9NRJ5 636 aaKnown RBP10.18□□□□□ -0.78
CDH23-211ENST00000475158 IP6K2Q9UHH9 426 aa10.18□□□□□ -0.78
CDH23-211ENST00000475158 CHN1P15882 459 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 SREBF1P36956 1147 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 EPHB1P54762 984 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 EIF3EP60228 445 aaKnown RBP10.17□□□□□ -0.78
CDH23-211ENST00000475158 IL17AQ16552 155 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 LRP10Q7Z4F1 713 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 CERS5Q8N5B7 392 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 ARL10Q8N8L6 244 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 SNF8Q96H20 258 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 BEGAINQ9BUH8 593 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 PARVAQ9NVD7 372 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 CFAP69A5D8W1 941 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 FAM187AA6NFU0 413 aa10.17□□□□□ -0.78
CDH23-211ENST00000475158 SMARCA1P28370 1054 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms