RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-208	ENST00000474839	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.84	□□□□□ -0.35
SKIV2L-208	ENST00000474839	CLUL1	Q15846	466 aa		12.84	□□□□□ -0.35
SKIV2L-208	ENST00000474839	MUM1	Q2TAK8	710 aa		12.84	□□□□□ -0.35
SKIV2L-208	ENST00000474839	CYFIP1	Q7L576	1253 aa		12.84	□□□□□ -0.35
SKIV2L-208	ENST00000474839	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.84	□□□□□ -0.35
SKIV2L-208	ENST00000474839	ANKRD35	Q8N283	1001 aa		12.84	□□□□□ -0.35
SKIV2L-208	ENST00000474839	LMO3	Q8TAP4	145 aa		12.84	□□□□□ -0.35
SKIV2L-208	ENST00000474839	CCHCR1	Q8TD31	782 aa		12.84	□□□□□ -0.35
SKIV2L-208	ENST00000474839	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.84	□□□□□ -0.35
SKIV2L-208	ENST00000474839	EBF2	Q9HAK2	575 aa		12.84	□□□□□ -0.35
SKIV2L-208	ENST00000474839	EME2	A4GXA9	379 aa	Predicted RBP	12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ALDH3A1	P30838	453 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MAGEA4	P43358	317 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	NSF	P46459	744 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SNRNP35	Q16560	246 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DAW1	Q8N136	415 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MAGEC3	Q8TD91	643 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SMC6	Q96SB8	1091 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TRABD	Q9H4I3	376 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	PPP1R12A	O14974	1030 aa	Predicted RBP	12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SMIM24	O75264	130 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CDH16	O75309	829 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	LGR5	O75473	907 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MXRA7	P84157	204 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	GPS1	Q13098	491 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SLC27A3	Q5K4L6	730 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SCYL3	Q8IZE3	742 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	GLIS1	Q8NBF1	620 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ATL2	Q8NHH9	583 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	NAF1	Q96HR8	494 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	FIZ1	Q96SL8	496 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	FAM213A	Q9BRX8	229 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SYT11	Q9BT88	431 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TUFT1	Q9NNX1	390 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SUGT1	Q9Y2Z0	365 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CENPF	P49454	3210 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839		A0A1W2PPM1	405 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	FAM47DP	A6NHR8	397 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	PSMD10	O75832	226 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	EIF2AK2	P19525	551 aa	Known RBP	12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TAC1	P20366	129 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	RPA3	P35244	121 aa	Predicted RBP	12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CGB2	Q6NT52	195 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ARMC2	Q8NEN0	867 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	RAB3IP	Q96QF0	476 aa	Predicted RBP	12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TRAIP	Q9BWF2	469 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	COA1	Q9GZY4	146 aa		12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SAE1	Q9UBE0	346 aa	Predicted RBP	12.83	□□□□□ -0.36
SKIV2L-208	ENST00000474839	IGLV3-22	A0A075B6J6	115 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CPA2	P48052	419 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	NOV	P48745	357 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	WDR4	P57081	412 aa	Known RBP	12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SARNP	P82979	210 aa	Known RBP	12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TAF1B	Q53T94	588 aa	Predicted RBP	12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MDH1B	Q5I0G3	518 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TMEM179	Q6ZVK1	233 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MTDH	Q86UE4	582 aa	Known RBP	12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	NYAP2	Q9P242	653 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DLEC1	Q9Y238	1755 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MAPK13	O15264	365 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CALR	P27797	417 aa	Known RBP	12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SIX1	Q15475	284 aa	Predicted RBP	12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SH3BP5L	Q7L8J4	393 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	AGBL1	Q96MI9	1066 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TXLNG	Q9NUQ3	528 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	GTF3C4	Q9UKN8	822 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ZHX2	Q9Y6X8	837 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	FRMPD4	Q14CM0	1322 aa		12.82	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TESPA1	A2RU30	521 aa	Predicted RBP	12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	C2orf71	A6NGG8	1288 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SGK1	O00141	431 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	POLRMT	O00411	1230 aa	Known RBP	12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	HNRNPDL	O14979	420 aa	Known RBP	12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MAFG	O15525	162 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	UNC5C	O95185	931 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	GGPS1	O95749	300 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CFH	P08603	1231 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ALAS1	P13196	640 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	PIK3CA	P42336	1068 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ARSE	P51690	589 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	PCNX4	Q63HM2	1172 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	PPP1R21	Q6ZMI0	780 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MAGEB18	Q96M61	343 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DCLK3	Q9C098	648 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ARHGEF3	Q9NR81	526 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DMAC2	Q9NW81	257 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	NOCT	Q9UK39	431 aa	Known RBP	12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	NEU2	Q9Y3R4	380 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DENND3	A2RUS2	1198 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SEZ6	Q53EL9	994 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	KRT39	Q6A163	491 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	GRK7	Q8WTQ7	553 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MBOAT7	Q96N66	472 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TMEM206	Q9H813	350 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	FAM198A	Q9UFP1	575 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms