RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 CBWD3Q5JTY5 395 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 GLRA4Q5JXX5 417 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 CBWD5Q5RIA9 395 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 C9orf50Q5SZB4 431 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 TCERG1LQ5VWI1 586 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 DPY19L2P1Q6NXN4 242 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 SARM1Q6SZW1 724 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 TRAPPC11Q7Z392 1133 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 NT5DC4Q86YG4 428 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 ZNF689Q96CS4 500 aaPredicted RBP10.83□□□□□ -0.68
COL8A1-206ENST00000474648 RC3H2Q9HBD1 1191 aaKnown RBP10.83□□□□□ -0.68
COL8A1-206ENST00000474648 LRFN2Q9ULH4 789 aa10.83□□□□□ -0.68
COL8A1-206ENST00000474648 CEP290O15078 2479 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 GOLGA6L3A6NEY3 463 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 ZBBXA8MT70 800 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 LGALS16A8MUM7 142 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
COL8A1-206ENST00000474648 STX10O60499 249 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 B4GALT3O60512 393 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 LRRN2O75325 713 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 DDHD2O94830 711 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 VNN1O95497 513 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 SERPINC1P01008 464 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 POMCP01189 267 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 THP07101 528 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 CYP3A5P20815 502 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 AP3M2P53677 418 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 UBASH3AP57075 661 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 TFAMQ00059 246 aaKnown RBP10.82□□□□□ -0.68
COL8A1-206ENST00000474648 KCNMA1Q12791 1236 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 TMEM132DQ14C87 1099 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 SHHQ15465 462 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 TDRD10Q5VZ19 366 aaKnown RBP10.82□□□□□ -0.68
COL8A1-206ENST00000474648 GLB1LQ6UWU2 654 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 USP37Q86T82 979 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 ZNF280BQ86YH2 543 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 C1orf127Q8N9H9 656 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 ANKRD20A12PQ8NF67 263 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 LMO3Q8TAP4 145 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 PHOSPHO2Q8TCD6 241 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 CACTINQ8WUQ7 758 aaKnown RBP10.82□□□□□ -0.68
COL8A1-206ENST00000474648 SEMA4DQ92854 862 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 MTMR12Q9C0I1 747 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 GRPEL1Q9HAV7 217 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 TMEM8AQ9HCN3 771 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 DPP3Q9NY33 737 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 IFNKQ9P0W0 207 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 TUBGCP4Q9UGJ1 667 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 SIX4Q9UIU6 781 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 UBQLN1Q9UMX0 589 aaKnown RBP10.82□□□□□ -0.68
COL8A1-206ENST00000474648 INPP5FQ9Y2H2 1132 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 COQ4Q9Y3A0 265 aa10.82□□□□□ -0.68
COL8A1-206ENST00000474648 TTC3P53804 2025 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 ANO9A1A5B4 782 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 TBKBP1A7MCY6 615 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 P4HA2O15460 535 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 HOXA2O43364 376 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 IGFBP6P24592 240 aaPredicted RBP10.81□□□□□ -0.68
COL8A1-206ENST00000474648 LRPAP1P30533 357 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 PBX1P40424 430 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 KCNJ6P48051 423 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 HTRA4P83105 476 aaPredicted RBP10.81□□□□□ -0.68
COL8A1-206ENST00000474648 DSC1Q08554 894 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 PTPN21Q16825 1174 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 EPC2Q52LR7 807 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 KRT39Q6A163 491 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 FAM117BQ6P1L5 589 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 EHBP1Q8NDI1 1231 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 TAS1R2Q8TE23 839 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 XPO4Q9C0E2 1151 aaKnown RBP10.81□□□□□ -0.68
COL8A1-206ENST00000474648 MMRN2Q9H8L6 949 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 TBC1D13Q9NVG8 400 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 KANSL3Q9P2N6 904 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 SLC4A7Q9Y6M7 1214 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 LTBP2Q14767 1821 aa10.81□□□□□ -0.68
COL8A1-206ENST00000474648 GTPBP10A4D1E9 387 aaKnown RBP10.8□□□□□ -0.68
COL8A1-206ENST00000474648 PIRO00625 290 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 PPEF2O14830 753 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 N4BP1O75113 896 aaKnown RBP10.8□□□□□ -0.68
COL8A1-206ENST00000474648 GJB5O95377 273 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 HLA-DRAP01903 254 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 TNNC2P02585 160 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 TMEM191BP0C7N4 346 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 MXI1P50539 228 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 ZNF75DP51815 510 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 UBXN1Q04323 297 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 GRIK3Q13003 919 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 FILIP1LQ4L180 1135 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 C9orf57Q5W0N0 161 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 CD300LGQ6UXG3 332 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 HERC6Q8IVU3 1022 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 COLGALT2Q8IYK4 626 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 BEST2Q8NFU1 509 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 URGCPQ8TCY9 931 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 RSPH1Q8WYR4 309 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 ANKRD36BP1Q96IX9 119 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 RPS6KC1Q96S38 1066 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 CRACR2AQ9BSW2 395 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 CWH43Q9H720 699 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 NRDE2Q9H7Z3 1164 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms