RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 GEMIN8Q9NWZ8 242 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 MYO1AQ9UBC5 1043 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 PCDHB8Q9UN66 801 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 YBX2Q9Y2T7 364 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 RRP15Q9Y3B9 282 aaKnown RBP4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 PCDHB13Q9Y5F0 798 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 ADGRA3Q8IWK6 1321 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 RALGAPA2Q2PPJ7 1873 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 TTC3P53804 2025 aa4.52□□□□□ -1.69
GAPVD1-216ENST00000474637 NPHP3-ACAD11A0A0J9YXS1 232 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 FRMD3A2A2Y4 597 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 TBKBP1A7MCY6 615 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 K7ENM7 598 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 SLC16A4O15374 487 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 CSDE1O75534 798 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 RB1P06400 928 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 CA3P07451 260 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ITGA4P13612 1032 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 IDEP14735 1019 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ARF4P18085 180 aaPredicted RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 HOXA11P31270 313 aaPredicted RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 KRT83P78385 493 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 AMPD2Q01433 879 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 BTG3Q14201 252 aaPredicted RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 BRD3Q15059 726 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 BEND6Q5SZJ8 279 aaPredicted RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ATF7IP2Q5U623 682 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 FAM117BQ6P1L5 589 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 SRLQ86TD4 932 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 GPIHBP1Q8IV16 184 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 FAM178BQ8IXR5 827 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ABI1Q8IZP0 508 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 NOA1Q8NC60 698 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 TMEM161BQ8NDZ6 487 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 URGCPQ8TCY9 931 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 NOC3LQ8WTT2 800 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 LRCH3Q96II8 777 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 CPB2Q96IY4 423 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ACO2Q99798 780 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 NUP58Q9BVL2 599 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 UBXN6Q9BZV1 441 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 TTYH3Q9C0H2 523 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ZHX3Q9H4I2 956 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 PDZD7Q9H5P4 517 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ZNF576Q9H609 170 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 YY1AP1Q9H869 796 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 RC3H2Q9HBD1 1191 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 CWC15Q9P013 229 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 KANSL3Q9P2N6 904 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 L1RE1Q9UN81 338 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 EXOC7Q9UPT5 735 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 TNFSF13BQ9Y275 285 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 GIT1Q9Y2X7 761 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 PCDHB2Q9Y5E7 798 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 PVALEFA0A1B0GWK0 134 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 LINC01553A4QN01 128 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 SFI1A8K8P3 1242 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 MAP2K7O14733 419 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 INPPL1O15357 1258 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 KRT86O43790 486 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 NPTXRO95502 500 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 PIGRP01833 764 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ATP1A1P05023 1023 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 PLEKP08567 350 aaPredicted RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 MCF2P10911 925 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 LAG3P18627 525 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 PBX2P40425 430 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ERVK-21P61565 698 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 VSNL1P62760 191 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 TUBB4BP68371 445 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ZBED6P86452 979 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 GTF2BQ00403 316 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 TAP1Q03518 808 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 MEA1Q16626 185 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 WHAMMP3Q1A5X7 153 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 UBXN11Q5T124 520 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 FKBP15Q5T1M5 1219 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 CENPPQ6IPU0 288 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 GLB1LQ6UWU2 654 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ZPBP2Q6X784 338 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 UNC13DQ70J99 1090 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 HAUS6Q7Z4H7 955 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 KIAA1328Q86T90 577 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 PACS2Q86VP3 889 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 LRRC43Q8N309 656 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 DEFB123Q8N688 67 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 GOLGA6L1Q8N7Z2 621 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 MSANTD4Q8NCY6 345 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 GLIS3Q8NEA6 775 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 HNRNPLLQ8WVV9 542 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 CLP1Q92989 425 aaKnown RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 DNAJC19Q96DA6 116 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 BICD1Q96G01 975 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 CCDC42Q96M95 316 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ACCSQ96QU6 501 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 MMS19Q96T76 1030 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 GAS2L1Q99501 681 aaPredicted RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 MMRN2Q9H8L6 949 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 RSAD1Q9HA92 442 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 OLFML3Q9NRN5 406 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms