RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 PODXLO00592 558 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 ABLIM1O14639 778 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 OGTO15294 1046 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 TGM5O43548 720 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 SPATA31D3P0C874 917 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 RPL17P18621 184 aaKnown RBP20.28■□□□□ 0.84
CCDC171-206ENST00000474193 GTF2BQ00403 316 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 PPP2R3AQ06190 1150 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 LIN9Q5TKA1 542 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 SPATA31D4Q6ZUB0 917 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 LNX1Q8TBB1 728 aaPredicted RBP20.28■□□□□ 0.84
CCDC171-206ENST00000474193 MSTO1Q9BUK6 570 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 RHOBTB2Q9BYZ6 727 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 MRPL44Q9H9J2 332 aaKnown RBP20.28■□□□□ 0.84
CCDC171-206ENST00000474193 GOLGA2P5Q9HBQ8 144 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 ZDHHC7Q9NXF8 308 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 EXOC7Q9UPT5 735 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 TRIP11Q15643 1979 aa20.28■□□□□ 0.84
CCDC171-206ENST00000474193 A0A087X0B3 334 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 PIGRP01833 764 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 IDEP14735 1019 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 FGFR3P22607 806 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 NMT1P30419 496 aaKnown RBP20.27■□□□□ 0.84
CCDC171-206ENST00000474193 NDUFA8P51970 172 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 UBE2HP62256 183 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 ZXDAP98168 799 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 POSTNQ15063 836 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 SLC10A6Q3KNW5 377 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 SEZ6Q53EL9 994 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 CD302Q8IX05 232 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 ZDHHC14Q8IZN3 488 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 LRRC15Q8TF66 581 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 SMG7Q92540 1137 aaKnown RBP20.27■□□□□ 0.84
CCDC171-206ENST00000474193 HVCN1Q96D96 273 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 MFSD14AQ96MC6 490 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 ST6GALNAC4Q9H4F1 302 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 CDH22Q9UJ99 828 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 HPSEQ9Y251 543 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 PCDHB13Q9Y5F0 798 aa20.27■□□□□ 0.84
CCDC171-206ENST00000474193 FAM237AA0A1B0GTK4 181 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 C2CD4DB7Z1M9 353 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 H7C4K7 107 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 MYBP10242 640 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 E2F4Q16254 413 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 PTPN21Q16825 1174 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 LILRA6Q6PI73 481 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 MAP4K3Q8IVH8 894 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 FAM212AQ96EL1 285 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 KIF12Q96FN5 646 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 ZMAT2Q96NC0 199 aaKnown RBP20.26■□□□□ 0.83
CCDC171-206ENST00000474193 CLSTN3Q9BQT9 956 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 TNMDQ9H2S6 317 aa20.26■□□□□ 0.83
CCDC171-206ENST00000474193 UBQLN1Q9UMX0 589 aaKnown RBP20.26■□□□□ 0.83
CCDC171-206ENST00000474193 SYN3O14994 580 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 ZNF202O95125 648 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 SLFN14P0C7P3 912 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 CXCL8P10145 99 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 MCM4P33991 863 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 OR1D2P34982 312 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 PPM1LQ5SGD2 360 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 TRIM67Q6ZTA4 783 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 STXBP4Q6ZWJ1 553 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 RTL10Q7L3V2 364 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 ZNF720Q7Z2F6 126 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 SFR1Q86XK3 245 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 CCDC65Q8IXS2 484 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 APPL2Q8NEU8 664 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 PRKD2Q9BZL6 878 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 GOLPH3LQ9H4A5 285 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 C11orf16Q9NQ32 467 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 LIMD1Q9UGP4 676 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 SORCS3Q9UPU3 1222 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 BACE2Q9Y5Z0 518 aa20.25■□□□□ 0.83
CCDC171-206ENST00000474193 A0A0B4J269 797 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 MYMKA6NI61 221 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 XYLBO75191 536 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 RFPL2O75678 378 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 ZMYND10O75800 440 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 HNRNPA1P09651 372 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCDC171-206ENST00000474193 CYP3A5P20815 502 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 GBP2P32456 591 aaPredicted RBP20.24■□□□□ 0.83
CCDC171-206ENST00000474193 ELF1P32519 619 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 BRCC3P46736 316 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 FAM160A1Q05DH4 1040 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 SOX4Q06945 474 aaPredicted RBP20.24■□□□□ 0.83
CCDC171-206ENST00000474193 SIGLEC14Q08ET2 396 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 MTMR3Q13615 1198 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 ALCAMQ13740 583 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 RAB33AQ14088 237 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 UVSSAQ2YD98 709 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 ZC2HC1CQ53FD0 456 aaPredicted RBP20.24■□□□□ 0.83
CCDC171-206ENST00000474193 UBALD2Q8IYN6 164 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 SYCP3Q8IZU3 236 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 C18orf25Q96B23 403 aaPredicted RBP20.24■□□□□ 0.83
CCDC171-206ENST00000474193 ACCSQ96QU6 501 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 WDR6Q9NNW5 1121 aaKnown RBP20.24■□□□□ 0.83
CCDC171-206ENST00000474193 MTRRQ9UBK8 725 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 SERTAD1Q9UHV2 236 aa20.24■□□□□ 0.83
CCDC171-206ENST00000474193 MTCL1Q9Y4B5 1905 aaKnown RBP20.23■□□□□ 0.83
CCDC171-206ENST00000474193 TTC26A0AVF1 554 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms