RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 FASTKD5Q7L8L6 764 aaKnown RBP6.13□□□□□ -1.43
FN1-219ENST00000474036 IFNL3Q8IZI9 196 aa6.13□□□□□ -1.43
FN1-219ENST00000474036 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.13□□□□□ -1.43
FN1-219ENST00000474036 PTPRN2Q92932 1015 aa6.13□□□□□ -1.43
FN1-219ENST00000474036 TEKT1Q969V4 418 aa6.13□□□□□ -1.43
FN1-219ENST00000474036 MBD6Q96DN6 1003 aa6.13□□□□□ -1.43
FN1-219ENST00000474036 SAMD11Q96NU1 681 aa6.13□□□□□ -1.43
FN1-219ENST00000474036 C1QTNF3Q9BXJ4 246 aa6.13□□□□□ -1.43
FN1-219ENST00000474036 SPTBN4Q9H254 2564 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 SMIM22K7EJ46 135 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 HOXB7P09629 217 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 ZNF28P17035 718 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 GRK2P25098 689 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 GRK3P35626 688 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 PDE1AP54750 535 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 EPHB4P54760 987 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 MLLT6P55198 1093 aaPredicted RBP6.12□□□□□ -1.43
FN1-219ENST00000474036 FKBP1AP62942 108 aaKnown RBP6.12□□□□□ -1.43
FN1-219ENST00000474036 ZXDAP98168 799 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 RBM10P98175 930 aaKnown RBP6.12□□□□□ -1.43
FN1-219ENST00000474036 NHLH1Q02575 133 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 CDSNQ15517 529 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 KIZQ2M2Z5 673 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 WDR78Q5VTH9 848 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 CASC1Q6TDU7 716 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 NOP9Q86U38 636 aaKnown RBP6.12□□□□□ -1.43
FN1-219ENST00000474036 CCAR1Q8IX12 1150 aaKnown RBP6.12□□□□□ -1.43
FN1-219ENST00000474036 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.12□□□□□ -1.43
FN1-219ENST00000474036 DNAAF4Q8WXU2 420 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 FERMT2Q96AC1 680 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 MRFAP1L1Q96HT8 127 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 LRRCC1Q9C099 1032 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 USP44Q9H0E7 712 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 EPB41L1Q9H4G0 881 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 CHMP5Q9NZZ3 219 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 PPP4R1LQ9P1A2 415 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 RBPJLQ9UBG7 517 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 MAP3K2Q9Y2U5 619 aa6.12□□□□□ -1.43
FN1-219ENST00000474036 CACNA1GO43497 2377 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 ZNF318Q5VUA4 2279 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 CACNA1FO60840 1977 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 RPAP1Q9BWH6 1393 aaPredicted RBP6.11□□□□□ -1.43
FN1-219ENST00000474036 ANKRD18BA2A2Z9 1011 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 PI4KAP2A4QPH2 592 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 TRIM43BA6NCK2 446 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 CXCL11O14625 94 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 HGSO14964 777 aaPredicted RBP6.11□□□□□ -1.43
FN1-219ENST00000474036 TADA3O75528 432 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 DGKIO75912 1065 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 SOD2P04179 222 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 SQSTM1Q13501 440 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 TAF7LQ5H9L4 462 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 ZC3H12BQ5HYM0 836 aaKnown RBP6.11□□□□□ -1.43
FN1-219ENST00000474036 EMC4Q5J8M3 183 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 AKNAD1Q5T1N1 836 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 BEND3Q5T5X7 828 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 STEAP3Q658P3 488 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 MAMDC2Q7Z304 686 aaPredicted RBP6.11□□□□□ -1.43
FN1-219ENST00000474036 LGI4Q8N135 537 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 PI4KAP1Q8N8J0 262 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 ZSWIM2Q8NEG5 633 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 PIP4K2CQ8TBX8 421 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 SNX21Q969T3 373 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 TRIM43Q96BQ3 446 aaPredicted RBP6.11□□□□□ -1.43
FN1-219ENST00000474036 KCNJ15Q99712 375 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 IPPKQ9H8X2 491 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 IL1RAPL2Q9NP60 686 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 AGTPBP1Q9UPW5 1226 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 SCN5AQ14524 2016 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 MCM3APO60318 1980 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 CHD9Q3L8U1 2897 aa6.11□□□□□ -1.43
FN1-219ENST00000474036 COL11A1P12107 1806 aaPredicted RBP6.11□□□□□ -1.43
FN1-219ENST00000474036 CACNA1BQ00975 2339 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 CFAP54Q96N23 3096 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 CHD7Q9P2D1 2997 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.1□□□□□ -1.43
FN1-219ENST00000474036 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.1□□□□□ -1.43
FN1-219ENST00000474036 TCRBV5S2A0A599 114 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 KBTBD13C9JR72 458 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 C1QTNF3-AMACRE9PGA6 284 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 EIF5BO60841 1220 aaKnown RBP6.1□□□□□ -1.43
FN1-219ENST00000474036 SURF6O75683 361 aaKnown RBP6.1□□□□□ -1.43
FN1-219ENST00000474036 LRG1P02750 347 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 HSP90AA1P07900 732 aaKnown RBP6.1□□□□□ -1.43
FN1-219ENST00000474036 HMGB1P09429 215 aaKnown RBP6.1□□□□□ -1.43
FN1-219ENST00000474036 COL6A2P12110 1019 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 MX1P20591 662 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 ITGB8P26012 769 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 HMGCS2P54868 508 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 GABREP78334 506 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 FPGSQ05932 587 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 NEXNQ0ZGT2 675 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 OS9Q13438 667 aaPredicted RBP6.1□□□□□ -1.43
FN1-219ENST00000474036 ICAM4Q14773 271 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 MAP3K21Q5TCX8 1036 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 OTOP3Q7RTS5 596 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 SPRED1Q7Z699 444 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 FAM83AQ86UY5 434 aa6.1□□□□□ -1.43
FN1-219ENST00000474036 ZC3H18Q86VM9 953 aaKnown RBP6.1□□□□□ -1.43
FN1-219ENST00000474036 SCYL3Q8IZE3 742 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms