RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 RPF1Q9H9Y2 349 aaKnown RBP24.56■■□□□ 1.52
PTP4A1-203ENST00000473334 MTRRQ9UBK8 725 aa24.56■■□□□ 1.52
PTP4A1-203ENST00000473334 TUBGCP4Q9UGJ1 667 aa24.56■■□□□ 1.52
PTP4A1-203ENST00000473334 USTQ9Y2C2 406 aa24.56■■□□□ 1.52
PTP4A1-203ENST00000473334 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.56■■□□□ 1.52
PTP4A1-203ENST00000473334 TRIOO75962 3097 aa24.56■■□□□ 1.52
PTP4A1-203ENST00000473334 ANKRD63C9JTQ0 380 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 I3L4J1 428 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 RFPL2O75678 378 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 PAPLNO95428 1278 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 ENOX2Q16206 610 aaKnown RBP24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 EDAQ92838 391 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 KIF12Q96FN5 646 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 STRA6Q9BX79 667 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 TNMDQ9H2S6 317 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 CUEDC2Q9H467 287 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 OLFML3Q9NRN5 406 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 ZDHHC7Q9NXF8 308 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 FBXW11Q9UKB1 542 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 NUB1Q9Y5A7 615 aa24.55■■□□□ 1.52
PTP4A1-203ENST00000473334 FRMD3A2A2Y4 597 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 LACTBL1A8MY62 500 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 SPAG1Q07617 926 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 E2F4Q16254 413 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 AXDND1Q5T1B0 1012 aaPredicted RBP24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 SLFN12LQ6IEE8 588 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 SHC4Q6S5L8 630 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 ANKS3Q6ZW76 656 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 TSPAN18Q96SJ8 248 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 LRRC27Q9C0I9 530 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 TBC1D7Q9P0N9 293 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 CPSF3Q9UKF6 684 aaKnown RBP24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 CFAP45Q9UL16 551 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 UBQLN1Q9UMX0 589 aaKnown RBP24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 BACE2Q9Y5Z0 518 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 STYXL1Q9Y6J8 313 aa24.54■■□□□ 1.52
PTP4A1-203ENST00000473334 ADAM12O43184 909 aa24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 XPOTO43592 962 aaKnown RBP24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 GCNT3O95395 438 aa24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 ADRB2P07550 413 aa24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 ZXDAP98168 799 aa24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 ZBTB6Q15916 424 aa24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 PTPN21Q16825 1174 aa24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 L1TD1Q5T7N2 865 aaKnown RBP24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 ADALQ6DHV7 355 aa24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 ZDHHC14Q8IZN3 488 aa24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 PLCD3Q8N3E9 789 aa24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 SMG7Q92540 1137 aaKnown RBP24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 ZNF707Q96C28 371 aaPredicted RBP24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 PANK4Q9NVE7 773 aa24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 EXOC7Q9UPT5 735 aa24.53■■□□□ 1.52
PTP4A1-203ENST00000473334 ANK1P16157 1881 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 TISP43B9A030 160 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 SYN3O14994 580 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 ZMYND10O75800 440 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 CYP3A5P20815 502 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 LRPAP1P30533 357 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 MCM4P33991 863 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 OR1D2P34982 312 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 ME1P48163 572 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 ALCAMQ13740 583 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 RAB33AQ14088 237 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 LIN9Q5TKA1 542 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 CD302Q8IX05 232 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 CCDC65Q8IXS2 484 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 IQUBQ8NA54 791 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 STAMQ92783 540 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 DHX58Q96C10 678 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 ACSF2Q96CM8 615 aaPredicted RBP24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 SUSD3Q96L08 255 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 ACCSQ96QU6 501 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 PRKD2Q9BZL6 878 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 KBTBD4Q9NVX7 518 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 AGO2Q9UKV8 859 aaKnown RBP24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 PCDHB13Q9Y5F0 798 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 CDY1Q9Y6F8 540 aa24.52■■□□□ 1.52
PTP4A1-203ENST00000473334 DNM1Q05193 864 aaKnown RBP24.51■■□□□ 1.51
PTP4A1-203ENST00000473334 VARS2Q5ST30 1063 aaKnown RBP24.51■■□□□ 1.51
PTP4A1-203ENST00000473334 RSPO2Q6UXX9 243 aaPredicted RBP24.51■■□□□ 1.51
PTP4A1-203ENST00000473334 OTOP3Q7RTS5 596 aa24.51■■□□□ 1.51
PTP4A1-203ENST00000473334 FAM212AQ96EL1 285 aa24.51■■□□□ 1.51
PTP4A1-203ENST00000473334 IKZF4Q9H2S9 585 aa24.51■■□□□ 1.51
PTP4A1-203ENST00000473334 PIDD1Q9HB75 910 aa24.51■■□□□ 1.51
PTP4A1-203ENST00000473334 WDR6Q9NNW5 1121 aaKnown RBP24.51■■□□□ 1.51
PTP4A1-203ENST00000473334 PCDHA7Q9UN72 937 aa24.51■■□□□ 1.51
PTP4A1-203ENST00000473334 CLUHO75153 1309 aa24.51■■□□□ 1.51
PTP4A1-203ENST00000473334 ACOT2P49753 483 aa24.5■■□□□ 1.51
PTP4A1-203ENST00000473334 CASP5P51878 434 aa24.5■■□□□ 1.51
PTP4A1-203ENST00000473334 AMPD3Q01432 767 aa24.5■■□□□ 1.51
PTP4A1-203ENST00000473334 KCNA1Q09470 495 aa24.5■■□□□ 1.51
PTP4A1-203ENST00000473334 POSTNQ15063 836 aa24.5■■□□□ 1.51
PTP4A1-203ENST00000473334 POMGNT1Q8WZA1 660 aa24.5■■□□□ 1.51
PTP4A1-203ENST00000473334 TRIM9Q9C026 710 aa24.5■■□□□ 1.51
PTP4A1-203ENST00000473334 TECTAO75443 2155 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 H7C4K7 107 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 C8AP07357 584 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 HOXA9P31269 272 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 SPATA1Q5VX52 437 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 JADE1Q6IE81 842 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 TRIM67Q6ZTA4 783 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms