RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 RNF19AQ9NV58 838 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 MIOSQ9NXC5 875 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 TAB2Q9NYJ8 693 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 MSRAQ9UJ68 235 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 FNDC1Q4ZHG4 1894 aaPredicted RBP18.2■□□□□ 0.5
CCM2-205ENST00000472223 PAX3P23760 479 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 PNPLA4P41247 253 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 OR1G1P47890 313 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 FMO5P49326 533 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 GATMP50440 423 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 COPB1P53618 953 aaKnown RBP18.19■□□□□ 0.5
CCM2-205ENST00000472223 HTRA4P83105 476 aaPredicted RBP18.19■□□□□ 0.5
CCM2-205ENST00000472223 MYL7Q01449 175 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 MYO1EQ12965 1108 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 PDCD11Q14690 1871 aaKnown RBP18.19■□□□□ 0.5
CCM2-205ENST00000472223 ZBTB6Q15916 424 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 CHRDL2Q6WN34 429 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 SV2AQ7L0J3 742 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 TRAPPC11Q7Z392 1133 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 GAS2L3Q86XJ1 694 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 EFCAB13Q8IY85 973 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 GSTCDQ8NEC7 633 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 C18orf25Q96B23 403 aaPredicted RBP18.19■□□□□ 0.5
CCM2-205ENST00000472223 ZNF560Q96MR9 790 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 TMEM175Q9BSA9 504 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 COLEC11Q9BWP8 271 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 FAN1Q9Y2M0 1017 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 RWDD3Q9Y3V2 267 aa18.19■□□□□ 0.5
CCM2-205ENST00000472223 PDE4DIPQ5VU43 2346 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 GOLGA6L3A6NEY3 463 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 LRRC10BA6NIK2 292 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 ZC3H11AO75152 810 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCM2-205ENST00000472223 ITGB3P05106 788 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 ATP1A3P13637 1013 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 LAG3P18627 525 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 PIK3CAP42336 1068 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 AFF1P51825 1210 aaKnown RBP18.18■□□□□ 0.5
CCM2-205ENST00000472223 UBASH3AP57075 661 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 MCCD1P59942 119 aaPredicted RBP18.18■□□□□ 0.5
CCM2-205ENST00000472223 FANCCQ00597 558 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 PPP3CAQ08209 521 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 RAB30Q15771 203 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 ZACNQ401N2 412 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 WDR44Q5JSH3 913 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 GBP6Q6ZN66 633 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 FBXL13Q8NEE6 735 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 OR5B17Q8NGF7 314 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 PLEKHO2Q8TD55 490 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 TUBGCP4Q9UGJ1 667 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 AGAP1Q9UPQ3 857 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 NUB1Q9Y5A7 615 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 PCDHB12Q9Y5F1 795 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 PCDHA11Q9Y5I1 949 aa18.18■□□□□ 0.5
CCM2-205ENST00000472223 ARHGEF37A1IGU5 675 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 CASTOR2A6NHX0 329 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 MEFVO15553 781 aaPredicted RBP18.17■□□□□ 0.5
CCM2-205ENST00000472223 C4BPAP04003 597 aaKnown RBP18.17■□□□□ 0.5
CCM2-205ENST00000472223 LRPAP1P30533 357 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 ATICP31939 592 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 WNT7BP56706 349 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 UBXN1Q04323 297 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 NCOA4Q13772 614 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 SGSM1Q2NKQ1 1148 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 DCLRE1AQ6PJP8 1040 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 ZNF516Q92618 1163 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 PCMTD1Q96MG8 357 aaPredicted RBP18.17■□□□□ 0.5
CCM2-205ENST00000472223 ZNF558Q96NG5 402 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 CXCL16Q9H2A7 254 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 HSD3B7Q9H2F3 369 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 NRDE2Q9H7Z3 1164 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 PLAGL2Q9UPG8 496 aa18.17■□□□□ 0.5
CCM2-205ENST00000472223 PODXLO00592 558 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 PMM2O15305 246 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 TRAPPC3O43617 180 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 TADA2AO75478 443 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 B3GAT3O94766 335 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 DDHD2O94830 711 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 P4HA1P13674 534 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 POLR2BP30876 1174 aaKnown RBP18.16■□□□□ 0.5
CCM2-205ENST00000472223 CLCNKBP51801 687 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 SV2CQ496J9 727 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 TDRD10Q5VZ19 366 aaKnown RBP18.16■□□□□ 0.5
CCM2-205ENST00000472223 C9orf57Q5W0N0 161 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 ZNF280BQ86YH2 543 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 COLGALT2Q8IYK4 626 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 LRRC52Q8N7C0 313 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 C1orf127Q8N9H9 656 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 TAF4BQ92750 862 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 RAB20Q9NX57 234 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 PTPRJQ12913 1337 aa18.16■□□□□ 0.5
CCM2-205ENST00000472223 A0A1W2PPC1 479 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 GTPBP10A4D1E9 387 aaKnown RBP18.15■□□□□ 0.5
CCM2-205ENST00000472223 LGALS16A8MUM7 142 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 HLA-DRAP01903 254 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 PPM1AP35813 382 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 TAF6P49848 677 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 RABGGTBP53611 331 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 BCAR1P56945 870 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 DSC1Q08554 894 aa18.15■□□□□ 0.5
CCM2-205ENST00000472223 UPP1Q16831 310 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms