RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 E7EWF7 191 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 PRB1P04280 392 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 CAPNS1P04632 268 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 CYP21A2P08686 494 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 AKAP5P24588 427 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 IRX4P78413 519 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 GRSF1Q12849 480 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDHR3-209ENST00000472116 ANKS3Q6ZW76 656 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 TMTC3Q6ZXV5 915 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 LURAP1LQ8IV03 231 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 RNF149Q8NC42 400 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 RDM1Q8NG50 284 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 TCP11Q8WWU5 503 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 HHIPQ96QV1 700 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 RIT2Q99578 217 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 NXF3Q9H4D5 531 aaKnown RBP11.38□□□□□ -0.59
CDHR3-209ENST00000472116 MINDY3Q9H8M7 445 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 TRPV4Q9HBA0 871 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 ASAH2Q9NR71 780 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 KLK14Q9P0G3 267 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 RAXQ9Y2V3 346 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 RAI2Q9Y5P3 530 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 SLC12A7Q9Y666 1083 aa11.38□□□□□ -0.59
CDHR3-209ENST00000472116 PTPRBP23467 1997 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 CCDC194A0A1B0GVG4 234 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 TMEM150BA6NC51 233 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 PATE3B3GLJ2 98 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 DCLK1O15075 740 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 ASAP2O43150 1006 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 MAP3K13O43283 966 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 APBB3O95704 486 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 DHPSP49366 369 aaPredicted RBP11.37□□□□□ -0.59
CDHR3-209ENST00000472116 FCHO2Q0JRZ9 810 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 USP39Q53GS9 565 aaKnown RBP11.37□□□□□ -0.59
CDHR3-209ENST00000472116 TRIM61Q5EBN2 209 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 WDR44Q5JSH3 913 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 LRCH2Q5VUJ6 765 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 LARP1BQ659C4 914 aaKnown RBP11.37□□□□□ -0.59
CDHR3-209ENST00000472116 PMS2CLQ68D20 193 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 SYNE3Q6ZMZ3 975 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 RAB44Q7Z6P3 723 aaPredicted RBP11.37□□□□□ -0.59
CDHR3-209ENST00000472116 ZNF461Q8TAF7 563 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 PRPF31Q8WWY3 499 aaKnown RBP11.37□□□□□ -0.59
CDHR3-209ENST00000472116 PIGKQ92643 395 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 EXOC4Q96A65 974 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 CPB2Q96IY4 423 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 ZSWIM3Q96MP5 696 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 TMEM209Q96SK2 561 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 PAAF1Q9BRP4 392 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 CYP4F11Q9HBI6 524 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 GTSE1Q9NYZ3 720 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 CACNG4Q9UBN1 327 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 EVLQ9UI08 416 aaPredicted RBP11.37□□□□□ -0.59
CDHR3-209ENST00000472116 BACE2Q9Y5Z0 518 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 SPTA1P02549 2419 aa11.37□□□□□ -0.59
CDHR3-209ENST00000472116 MYO16Q9Y6X6 1858 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 LAMA5O15230 3695 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 J3QKU1 62 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 MEFVO15553 781 aaPredicted RBP11.36□□□□□ -0.59
CDHR3-209ENST00000472116 TRAPPC3O43617 180 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 TSPAN1O60635 241 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 FGFR3P22607 806 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 CCR2P41597 374 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 CLK2P49760 499 aaKnown RBP11.36□□□□□ -0.59
CDHR3-209ENST00000472116 DGKEP52429 567 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 ANTXR2P58335 489 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 PLCB2Q00722 1185 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 AMPD2Q01433 879 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 LAMTOR4Q0VGL1 99 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 FANCBQ8NB91 859 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 GSTCDQ8NEC7 633 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 MDM1Q8TC05 714 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 MTA3Q9BTC8 594 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 UNC45AQ9H3U1 944 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 RCAN3Q9UKA8 241 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 PCDHB9Q9Y5E1 797 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 INSL5Q9Y5Q6 135 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 TNRC6BQ9UPQ9 1833 aaKnown RBP11.36□□□□□ -0.59
CDHR3-209ENST00000472116 UNC79Q9P2D8 2635 aa11.36□□□□□ -0.59
CDHR3-209ENST00000472116 CAPN8A6NHC0 703 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 UPK3BL1B0FP48 263 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 UPK3BL2E5RIL1 263 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 NRG2O14511 850 aaPredicted RBP11.35□□□□□ -0.59
CDHR3-209ENST00000472116 CAPN9O14815 690 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 DKC1O60832 514 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDHR3-209ENST00000472116 NPTXRO95502 500 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 THP07101 528 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 GJA1P17302 382 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 TIE1P35590 1138 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 DPP6P42658 865 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 ARPP19P56211 112 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 ROR1Q01973 937 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 SEMA3BQ13214 749 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 TFDP1Q14186 410 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 TEAD2Q15562 447 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 ITPRIPL2Q3MIP1 535 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 TYW1BQ6NUM6 668 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 PKN3Q6P5Z2 889 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 SLC27A1Q6PCB7 646 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms