RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 SSC5DA1L4H1 1573 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 SOWAHBA6NEL2 793 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 CLDN3O15551 220 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 ASAP2O43150 1006 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 LGR5O75473 907 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 PROSCO94903 275 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 VNN1O95497 513 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 ECEL1O95672 775 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 ITIH2P19823 946 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 ACOT2P49753 483 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 PMS2P54278 862 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 CALCOCO2Q13137 446 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 DENND2CQ68D51 928 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 CDCA2Q69YH5 1023 aaPredicted RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 CEP128Q6ZU80 1094 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 MICALCLQ6ZW33 695 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 NCAPG2Q86XI2 1143 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 PCYT2Q99447 389 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 PI4K2AQ9BTU6 479 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 TARS2Q9BW92 718 aaKnown RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 WHRNQ9P202 907 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 BTBD7Q9P203 1132 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 GGA2Q9UJY4 613 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 SNX24Q9Y343 169 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 ARID2Q68CP9 1835 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 CNTNAP2Q9UHC6 1331 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 LOC285556D6RIA3 1793 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 A0A0G2JLL6 359 aaPredicted RBP11.34□□□□□ -0.59
APLF-204ENST00000471727 LSM8O95777 96 aaKnown RBP11.34□□□□□ -0.59
APLF-204ENST00000471727 RARAP10276 462 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 RARGP13631 454 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 GNA15P30679 374 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 LSP1P33241 339 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 PLTPP55058 493 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 YWHAEP62258 255 aaKnown RBP11.34□□□□□ -0.59
APLF-204ENST00000471727 TAP1Q03518 808 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 NCOA4Q13772 614 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 BYSLQ13895 437 aaKnown RBP11.34□□□□□ -0.59
APLF-204ENST00000471727 CAPSQ13938 189 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 TFDP1Q14186 410 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 SIX1Q15475 284 aaPredicted RBP11.34□□□□□ -0.59
APLF-204ENST00000471727 C6orf118Q5T5N4 469 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 ZDHHC24Q6UX98 284 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 MON1BQ7L1V2 547 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 ARMC9Q7Z3E5 817 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 PRRT2Q7Z6L0 340 aaPredicted RBP11.34□□□□□ -0.59
APLF-204ENST00000471727 ADAT2Q7Z6V5 191 aaKnown RBP11.34□□□□□ -0.59
APLF-204ENST00000471727 ERO1BQ86YB8 467 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 SULF1Q8IWU6 871 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 RHOT1Q8IXI2 618 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 SH2D3CQ8N5H7 860 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 BBOF1Q8ND07 529 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 GLG1Q92896 1179 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 ART4Q93070 314 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 C18orf8Q96DM3 657 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 PGM2Q96G03 612 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 PAGR1Q9BTK6 254 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 ROPN1BQ9BZX4 212 aaPredicted RBP11.34□□□□□ -0.59
APLF-204ENST00000471727 TRIM31Q9BZY9 425 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 ZNF518BQ9C0D4 1074 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 ROPN1Q9HAT0 212 aaPredicted RBP11.34□□□□□ -0.59
APLF-204ENST00000471727 ACP6Q9NPH0 428 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 ADAM22Q9P0K1 906 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 ATP8A1Q9Y2Q0 1164 aa11.34□□□□□ -0.59
APLF-204ENST00000471727 COL11A1P12107 1806 aaPredicted RBP11.34□□□□□ -0.59
APLF-204ENST00000471727 ATXN2Q99700 1313 aaKnown RBP11.33□□□□□ -0.6
APLF-204ENST00000471727 IGKV6-21A0A0C4DH24 114 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 NDUFAB1O14561 156 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 NDC80O14777 642 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 OGTO15294 1046 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 ATMINO43313 823 aaPredicted RBP11.33□□□□□ -0.6
APLF-204ENST00000471727 THAP12O43422 761 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 CALB1P05937 261 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 NF2P35240 595 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 TCF7P36402 384 aaPredicted RBP11.33□□□□□ -0.6
APLF-204ENST00000471727 FLT3P36888 993 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 MARCKSL1P49006 195 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 PPP2R2AP63151 447 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 NOMO3P69849 1222 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 NOP14P78316 857 aaKnown RBP11.33□□□□□ -0.6
APLF-204ENST00000471727 LMNB2Q03252 620 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 MCL1Q07820 350 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 ADCY2Q08462 1091 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 MAPK6Q16659 721 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 DUOXA2Q1HG44 320 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 SGSM1Q2NKQ1 1148 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 KRT71Q3SY84 523 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 SGO2Q562F6 1265 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 ODF2Q5BJF6 829 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 TREML2Q5T2D2 321 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 PLEKHA7Q6IQ23 1121 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 GADL1Q6ZQY3 521 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 TRMT10CQ7L0Y3 403 aaKnown RBP11.33□□□□□ -0.6
APLF-204ENST00000471727 RBBP8NLQ8NC74 664 aaPredicted RBP11.33□□□□□ -0.6
APLF-204ENST00000471727 ATL2Q8NHH9 583 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 PRPF31Q8WWY3 499 aaKnown RBP11.33□□□□□ -0.6
APLF-204ENST00000471727 CENPTQ96BT3 561 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 CYFIP2Q96F07 1278 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms