RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 EPN2O95208 641 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 CPB1P15086 417 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 CDR1P51861 262 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 LIMK1P53667 647 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 EXOSC10Q01780 885 aaKnown RBP7.59□□□□□ -1.19
HDAC1-204ENST00000471488 ROR1Q01973 937 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 TWF1Q12792 350 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 AAMPQ13685 434 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 NECTIN1Q15223 517 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 PCBP1Q15365 356 aaKnown RBP eCLIP7.59□□□□□ -1.19
HDAC1-204ENST00000471488 DGKKQ5KSL6 1271 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 DAB2IPQ5VWQ8 1189 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 TXNDC11Q6PKC3 985 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 C19orf48Q6RUI8 117 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 ANKS3Q6ZW76 656 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 HAUS6Q7Z4H7 955 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 TTC30AQ86WT1 665 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 MAP4K3Q8IVH8 894 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 ZBTB8OSQ8IWT0 167 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 GPR65Q8IYL9 337 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 TRIM22Q8IYM9 498 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 BLIDQ8IZY5 108 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 ETNPPLQ8TBG4 499 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 DEPDC1BQ8WUY9 529 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 GAB3Q8WWW8 586 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 KIF12Q96FN5 646 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 DDX27Q96GQ7 796 aaKnown RBP7.59□□□□□ -1.19
HDAC1-204ENST00000471488 MKNK1Q9BUB5 465 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 C22orf23Q9BZE7 217 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 ZSWIM4Q9H7M6 989 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 GPRC5CQ9NQ84 441 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 POLR3BQ9NW08 1133 aaPredicted RBP7.59□□□□□ -1.19
HDAC1-204ENST00000471488 GTSE1Q9NYZ3 720 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 PCDHA4Q9UN74 947 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 NUB1Q9Y5A7 615 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 INSL5Q9Y5Q6 135 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 CCDC194A0A1B0GVG4 234 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 A0A1W2PRU2 124 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 CPLX1O14810 134 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 N4BP3O15049 544 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 DCLK1O15075 740 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 PAPLNO95428 1278 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 SEC24AO95486 1093 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 GLRA2P23416 452 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 OSTNP61366 133 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 SSRP1Q08945 709 aaKnown RBP7.58□□□□□ -1.2
HDAC1-204ENST00000471488 SPIRE1Q08AE8 756 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 PSMD2Q13200 908 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 PPP2R5CQ13362 524 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 PRPF4BQ13523 1007 aaKnown RBP7.58□□□□□ -1.2
HDAC1-204ENST00000471488 ELF2Q15723 593 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 AMHR2Q16671 573 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 CTXN3Q4LDR2 81 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 PRSS36Q5K4E3 855 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 MFSD6LQ8IWD5 586 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 ZNF687Q8N1G0 1237 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 SPRYD3Q8NCJ5 442 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 DEFB124Q8NES8 71 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 ZNF461Q8TAF7 563 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 PIGOQ8TEQ8 1089 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 YTHDC1Q96MU7 727 aaKnown RBP7.58□□□□□ -1.2
HDAC1-204ENST00000471488 JAKMIP1Q96N16 626 aaKnown RBP7.58□□□□□ -1.2
HDAC1-204ENST00000471488 HHIPQ96QV1 700 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 C8orf33Q9H7E9 229 aaPredicted RBP7.58□□□□□ -1.2
HDAC1-204ENST00000471488 XPNPEP1Q9NQW7 623 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 VPS45Q9NRW7 570 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 PRMT7Q9NVM4 692 aaPredicted RBP7.58□□□□□ -1.2
HDAC1-204ENST00000471488 VAV3Q9UKW4 847 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 KCNJ14Q9UNX9 436 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 PPME1Q9Y570 386 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 SDK1Q7Z5N4 2213 aa7.58□□□□□ -1.2
HDAC1-204ENST00000471488 NCANO14594 1321 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 ASPMQ8IZT6 3477 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 A0A1B0GUA9 196 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 TTLL13PA6NNM8 815 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 H7C4K7 107 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 TM4SF5O14894 197 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 HYAL3O43820 417 aaPredicted RBP7.57□□□□□ -1.2
HDAC1-204ENST00000471488 DGAT1O75907 488 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 BAG4O95429 457 aaKnown RBP7.57□□□□□ -1.2
HDAC1-204ENST00000471488 CAVIN2O95810 425 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 POU2F2P09086 479 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 HMGB1P09429 215 aaKnown RBP7.57□□□□□ -1.2
HDAC1-204ENST00000471488 HARSP12081 509 aaKnown RBP7.57□□□□□ -1.2
HDAC1-204ENST00000471488 ATP2B1P20020 1258 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 FGFR3P22607 806 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 CTHP32929 405 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 MCM4P33991 863 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 YARSP54577 528 aaKnown RBP7.57□□□□□ -1.2
HDAC1-204ENST00000471488 TNK2Q07912 1038 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 STK3Q13188 491 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 KRT32Q14532 448 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 EPHA7Q15375 998 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 STXBP5Q5T5C0 1151 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 PKN3Q6P5Z2 889 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 B3GNT9Q6UX72 402 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 POTEDQ86YR6 584 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 C4orf19Q8IY42 314 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 RASEFQ8IZ41 740 aa7.57□□□□□ -1.2
HDAC1-204ENST00000471488 KDF1Q8NAX2 398 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms