RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 CCDC78A2IDD5 438 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 CDHR4A6H8M9 788 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 SERINC4A6NH21 518 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 PRSS23O95084 383 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 FOSP01100 380 aaPredicted RBP1.97□□□□□ -2.09
UBXN4-207ENST00000471246 POMCP01189 267 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 AMY1AP04745 511 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 HKR1P10072 659 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 ITGAMP11215 1152 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 ALAS1P13196 640 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 KRT10P13645 584 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 GSPT1P15170 499 aaKnown RBP1.97□□□□□ -2.09
UBXN4-207ENST00000471246 HOXB6P17509 224 aaKnown RBP1.97□□□□□ -2.09
UBXN4-207ENST00000471246 FDXRP22570 491 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 GCSHP23434 173 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 CD38P28907 300 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 AVPR1BP47901 424 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 USP14P54578 494 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 HSD11B2P80365 405 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 ATP8B2P98198 1209 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 TAP1Q03518 808 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 SCAPQ12770 1279 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 RESTQ13127 1097 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 CLUL1Q15846 466 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 ABCB5Q2M3G0 1257 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 TSHZ3Q63HK5 1081 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 B3GNTL1Q67FW5 361 aaPredicted RBP1.97□□□□□ -2.09
UBXN4-207ENST00000471246 ARMC6Q6NXE6 501 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 MIGA2Q7L4E1 593 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 CBARPQ8N350 705 aaPredicted RBP1.97□□□□□ -2.09
UBXN4-207ENST00000471246 SLC44A3Q8N4M1 653 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 PPM1NQ8N819 430 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 DCBLD1Q8N8Z6 715 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.97□□□□□ -2.09
UBXN4-207ENST00000471246 NRG4Q8WWG1 115 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 STON2Q8WXE9 905 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 SSH1Q8WYL5 1049 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 LINC00476Q8WZB0 136 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 DPF2Q92785 391 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 CAVIN3Q969G5 261 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 MTMR8Q96EF0 704 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 RNF31Q96EP0 1072 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 COQ10AQ96MF6 247 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 C7orf25Q9BPX7 421 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 ALOXE3Q9BYJ1 711 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 REXO4Q9GZR2 422 aaKnown RBP1.97□□□□□ -2.09
UBXN4-207ENST00000471246 PUS7LQ9H0K6 701 aaKnown RBP1.97□□□□□ -2.09
UBXN4-207ENST00000471246 SPC25Q9HBM1 224 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 SLC5A4Q9NY91 659 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 KCNE5Q9UJ90 142 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 TUBD1Q9UJT1 453 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 TRHDEQ9UKU6 1024 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 ATP8A1Q9Y2Q0 1164 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 AATKQ6ZMQ8 1374 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 MYBBP1AQ9BQG0 1328 aaKnown RBP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 FZD9O00144 591 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 KIAA0391O15091 583 aaKnown RBP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 XPOTO43592 962 aaKnown RBP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 NDUFS2O75306 463 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 HAUS5O94927 633 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 GPANK1O95872 356 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 MYBL2P10244 700 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 EGR2P11161 476 aaPredicted RBP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 FCER1AP12319 257 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 DDCP20711 480 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 C5AR1P21730 350 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 CDKN1CP49918 316 aaPredicted RBP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 SLC16A1P53985 500 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 SEC24CP53992 1094 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 NOMO3P69849 1222 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 CXADRP78310 365 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 BLOC1S1P78537 153 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 SLFN5Q08AF3 891 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 FOXI1Q12951 378 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 TARDBPQ13148 414 aaKnown RBP eCLIP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 MTMR1Q13613 665 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 UBXN2BQ14CS0 331 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 ACAP2Q15057 778 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 ATP2B3Q16720 1220 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 INAVAQ3KP66 663 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 SPDYE7PQ495Y7 208 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 NOMO2Q5JPE7 1267 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 DACT2Q5SW24 774 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 RNF187Q5TA31 235 aaPredicted RBP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 ABHD17BQ5VST6 288 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 SYDE2Q5VT97 1194 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 OLFML1Q6UWY5 402 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 GPR149Q86SP6 731 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 RHOT1Q8IXI2 618 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 TMEM132CQ8N3T6 1108 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 C1orf162Q8NEQ5 155 aaPredicted RBP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 JADE3Q92613 823 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 CYFIP2Q96F07 1278 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 TMX3Q96JJ7 454 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 C11orf54Q9H0W9 315 aaPredicted RBP1.96□□□□□ -2.1
UBXN4-207ENST00000471246 PRDM13Q9H4Q3 707 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 RIOX1Q9H6W3 641 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 GALNT9Q9HCQ5 603 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 MKS1Q9NXB0 559 aa1.96□□□□□ -2.1
UBXN4-207ENST00000471246 FAM30AQ9NZY2 134 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms