RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 DCXO43602 365 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 IL18RAPO95256 599 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 SMIM10L2AP0DMW4 78 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 SMIM10L2BP0DMW5 78 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 MCF2P10911 925 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 UCHL3P15374 230 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 PRKCIP41743 596 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 GPC3P51654 580 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 ADKP55263 362 aaKnown RBP9.89□□□□□ -0.83
PTPRE-207ENST00000471218 KCNMA1Q12791 1236 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 PRPF4BQ13523 1007 aaKnown RBP9.89□□□□□ -0.83
PTPRE-207ENST00000471218 TRIM71Q2Q1W2 868 aaKnown RBP9.89□□□□□ -0.83
PTPRE-207ENST00000471218 DCAF4L1Q3SXM0 396 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 EPC2Q52LR7 807 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 MARCH8Q5T0T0 291 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 C10orf76Q5T2E6 689 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 PDXDC1Q6P996 788 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 TRIM65Q6PJ69 517 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 RSPH3Q86UC2 560 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 NT5DC4Q86YG4 428 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 RHPN2Q8IUC4 686 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 CD302Q8IX05 232 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 KIAA0319LQ8IZA0 1049 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 METTL13Q8N6R0 699 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 EHBP1Q8NDI1 1231 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.89□□□□□ -0.83
PTPRE-207ENST00000471218 UBE2Q2Q8WVN8 375 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 LMBR1Q8WVP7 490 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 ZNF830Q96NB3 372 aaPredicted RBP9.89□□□□□ -0.83
PTPRE-207ENST00000471218 FNBP1Q96RU3 617 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 C11orf84Q9BUA3 381 aaPredicted RBP9.89□□□□□ -0.83
PTPRE-207ENST00000471218 MSTO1Q9BUK6 570 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 LSM14BQ9BX40 385 aaKnown RBP9.89□□□□□ -0.83
PTPRE-207ENST00000471218 STK33Q9BYT3 514 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 NSUN3Q9H649 340 aaKnown RBP9.89□□□□□ -0.83
PTPRE-207ENST00000471218 IFT122Q9HBG6 1241 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 RNF216Q9NWF9 866 aaPredicted RBP9.89□□□□□ -0.83
PTPRE-207ENST00000471218 DOCK5Q9H7D0 1870 aa9.89□□□□□ -0.83
PTPRE-207ENST00000471218 EIF3CLB5ME19 914 aaKnown RBP9.88□□□□□ -0.83
PTPRE-207ENST00000471218 ABLIM1O14639 778 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 FAM189A1O60320 539 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 NOL4O94818 638 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 ARHGEF15O94989 841 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 LCA5LO95447 670 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 SERPING1P05155 500 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 CLCN3P51790 818 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 JAM2P57087 298 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 GCNT1Q02742 428 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 GPM6BQ13491 265 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 ATF7IP2Q5U623 682 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 SFMBT2Q5VUG0 894 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 E4F1Q66K89 784 aaPredicted RBP9.88□□□□□ -0.83
PTPRE-207ENST00000471218 DPY19L2P1Q6NXN4 242 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 C15orf39Q6ZRI6 1047 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 NYAP1Q6ZVC0 841 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 TRMT1LQ7Z2T5 733 aaKnown RBP9.88□□□□□ -0.83
PTPRE-207ENST00000471218 VPS36Q86VN1 386 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 CBWD2Q8IUF1 395 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 WDR49Q8IV35 697 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 KSR1Q8IVT5 923 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 TMEM192Q8IY95 271 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 LRRC71Q8N4P6 559 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 FIBCD1Q8N539 461 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 FBXL13Q8NEE6 735 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 EIF3CQ99613 913 aaKnown RBP9.88□□□□□ -0.83
PTPRE-207ENST00000471218 CGRRF1Q99675 332 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 GCOM2Q9BZD3 368 aaPredicted RBP9.88□□□□□ -0.83
PTPRE-207ENST00000471218 TSGA10Q9BZW7 698 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 INTS2Q9H0H0 1204 aaKnown RBP9.88□□□□□ -0.83
PTPRE-207ENST00000471218 POLD4Q9HCU8 107 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 AKT3Q9Y243 479 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 ADGRG1Q9Y653 693 aa9.88□□□□□ -0.83
PTPRE-207ENST00000471218 C5orf67F2Z3F1 127 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 RBAK-RBAKDNI3L0D1 243 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 INO80B-WBP1J3KQ70 363 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 OFD1O75665 1012 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 NDUFA10O95299 355 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 ADRB2P07550 413 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 CLTAP09496 248 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 SRGAP2CP0DJJ0 459 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 FERP16591 822 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 STAT1P42224 750 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 POLR2FP61218 127 aaKnown RBP9.87□□□□□ -0.83
PTPRE-207ENST00000471218 DRP2Q13474 957 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 COL19A1Q14993 1142 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 AMHR2Q16671 573 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 ZACNQ401N2 412 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 C1orf220Q5T0J3 134 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 FAM117BQ6P1L5 589 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 WDR59Q6PJI9 974 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 TRAF7Q6Q0C0 670 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 RRAGAQ7L523 313 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 ADHFE1Q8IWW8 467 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 LMO3Q8TAP4 145 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 CPLX3Q8WVH0 158 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 TAF4BQ92750 862 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 CALR3Q96L12 384 aaKnown RBP9.87□□□□□ -0.83
PTPRE-207ENST00000471218 CCDC42Q96M95 316 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 NLRP4Q96MN2 994 aa9.87□□□□□ -0.83
PTPRE-207ENST00000471218 SPAG5Q96R06 1193 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms