RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 NCF4Q15080 339 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF544Q6NX49 715 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SNF8Q96H20 258 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CDHR1Q96JP9 859 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CNDP1Q96KN2 507 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 NPHS2Q9NP85 383 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ING3Q9NXR8 418 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 MARCOQ9UEW3 520 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 AATKQ6ZMQ8 1374 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SYNGAP1Q96PV0 1343 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CAND2O75155 1236 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PTPN1P18031 435 aaKnown RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 HSPA9P38646 679 aaKnown RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CAV1Q03135 178 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 RASGRF1Q13972 1273 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 HIST2H2ACQ16777 129 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 HIST2H2AA3Q6FI13 130 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 TYW3Q6IPR3 259 aaKnown RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 MIGA2Q7L4E1 593 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SFR1Q86XK3 245 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF786Q8N393 782 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SHCBP1Q8NEM2 672 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 VPS37AQ8NEZ2 397 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CASP10Q92851 521 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 AGAP3Q96P47 875 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 UBXN6Q9BZV1 441 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CAAP1Q9H8G2 361 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 HPS5Q9UPZ3 1129 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ERBB3P21860 1342 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 PARNO95453 639 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ALBP02768 609 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ATP6V1B1P15313 513 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 TCEAL5Q5H9L2 206 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ARMC4Q5T2S8 1044 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 PTRHD1Q6GMV3 140 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 RSPH1Q8WYR4 309 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 EDC3Q96F86 508 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 MAGED4Q96JG8 741 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 TINF2Q9BSI4 451 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 THAP9Q9H5L6 903 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 TASP1Q9H6P5 420 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 TOPORSQ9NS56 1045 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 POLR1DQ9Y2S0 133 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ARL2BPQ9Y2Y0 163 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 DEPDC5O75140 1603 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 NOS1P29475 1434 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 LOC102724159A0A0B4J2E5 919 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 IQCMA0A1B0GVH7 501 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 H2AFYO75367 372 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 TTLL1O95922 423 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 PWP2Q15269 919 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ASPRV1Q53RT3 343 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ARMC3Q5W041 872 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ULK3Q6PHR2 472 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 TMEM35BQ8NCS4 154 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 UBASH3BQ8TF42 649 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 KLHL20Q9Y2M5 609 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 FHOD1Q9Y613 1164 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 LDHAP00338 332 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 MYL2P10916 166 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 CTSWP56202 376 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 BCAR1P56945 870 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 MIIPQ5JXC2 388 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 IL31Q6EBC2 164 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 OTOAQ7RTW8 1153 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF438Q7Z4V0 828 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ZBTB38Q8NAP3 1195 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 STKLD1Q8NE28 680 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF564Q8TBZ8 553 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 MRPL48Q96GC5 212 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 FAM213AQ9BRX8 229 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 COPS7BQ9H9Q2 264 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 POLR1BQ9H9Y6 1135 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 KLHL11Q9NVR0 708 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 DDX56Q9NY93 547 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 MAP3K20Q9NYL2 800 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 CHMP2BQ9UQN3 213 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 SUPT6HQ7KZ85 1726 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 EVPLLA8MZ36 301 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 AP3D1O14617 1153 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 PPEF1O14829 653 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 DYRK3O43781 588 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 NDUFA10O95299 355 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 FGFR4P22455 802 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 MCCD1P59942 119 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 TPI1P60174 286 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 FKBP3Q00688 224 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 USP10Q14694 798 aaKnown RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 TAF13Q15543 124 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 SUPT20HL1Q3ZLR7 823 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 TRIQKQ629K1 86 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 CACTIN-AS1Q8N1I8 211 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 FAM217BQ9NTX9 383 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-210ENST00000471181 IP6K2Q9UHH9 426 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 A0A087WWV3 80 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 A8MXQ7 604 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 CLDN3O15551 220 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 KCNN4O15554 427 aa7.22□□□□□ -1.25
BRCA1-210ENST00000471181 MYBL1P10243 752 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms