RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 KCNA10Q16322 511 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 EXOC3L4Q17RC7 722 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 ZNF385CQ66K41 422 aaPredicted RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 FBXO38Q6PIJ6 1188 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 GBP6Q6ZN66 633 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 RNF207Q6ZRF8 634 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 INTS8Q75QN2 995 aaKnown RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 OTUD6AQ7L8S5 288 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 TRAPPC11Q7Z392 1133 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 ZNF572Q7Z3I7 529 aaPredicted RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 MIER3Q7Z3K6 550 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 KRT222Q8N1A0 295 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 SLC35F6Q8N357 371 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 DEFB123Q8N688 67 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 MSANTD4Q8NCY6 345 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 ACRBPQ8NEB7 543 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 MCPH1Q8NEM0 835 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 SYTL5Q8TDW5 730 aaPredicted RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 NSUN6Q8TEA1 469 aaKnown RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 KIFAP3Q92845 792 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 BADQ92934 168 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 ATP6V0A1Q93050 837 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 TRIM43Q96BQ3 446 aaPredicted RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 DYDC2Q96IM9 177 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 NOX5Q96PH1 765 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 SPAG5Q96R06 1193 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 CARD6Q9BX69 1037 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 KATNBL1Q9H079 304 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 AGO4Q9HCK5 861 aaKnown RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 ARFGAP3Q9NP61 516 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 VTA1Q9NP79 307 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 KCNH7Q9NS40 1196 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 FAM207AQ9NSI2 230 aaPredicted RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 AGPAT5Q9NUQ2 364 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 TMEM39AQ9NV64 488 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 CYP39A1Q9NYL5 469 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 CXXC1Q9P0U4 656 aaPredicted RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 RAB21Q9UL25 225 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 FRMD4BQ9Y2L6 1034 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 REXO2Q9Y3B8 237 aaKnown RBP6.15□□□□□ -1.42
HDAC8-216ENST00000470998 SAR1BQ9Y6B6 198 aa6.15□□□□□ -1.42
HDAC8-216ENST00000470998 TRIOBPQ9H2D6 2365 aa6.15□□□□□ -1.43
HDAC8-216ENST00000470998 MYH4Q9Y623 1939 aa6.15□□□□□ -1.43
HDAC8-216ENST00000470998 A0A0A6YYK5 440 aaPredicted RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 LRRC53A6NM62 1247 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 NKRFO15226 690 aaKnown RBP eCLIP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 PQBP1O60828 265 aaKnown RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 EIF3JO75822 258 aaKnown RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 TIMP1P01033 207 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ASGR1P07306 291 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 CELA2BP08218 269 aaPredicted RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 KRT13P13646 458 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 PLS3P13797 630 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ITGB5P18084 799 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 AMPD1P23109 780 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ADH6P28332 368 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 RARRES1P49788 294 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 RPS6P62753 249 aaKnown RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 RBM10P98175 930 aaKnown RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 CNTN2Q02246 1040 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 CYP4A11Q02928 519 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 TNFAIP2Q03169 654 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 FPGSQ05932 587 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 GABPB1Q06547 395 aaPredicted RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 FAAP100Q0VG06 881 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 PGM5Q15124 567 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 SHHQ15465 462 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ASIC2Q16515 512 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 SLC18A3Q16572 532 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ERCC6LQ2NKX8 1250 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ASTE1Q2TB18 679 aaPredicted RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 TDRD12Q587J7 1177 aaKnown RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ODR4Q5SWX8 454 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 MFSD5Q6N075 450 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 WDR93Q6P2C0 686 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 LYPD4Q6UWN0 246 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 RRAGAQ7L523 313 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ZNF720Q7Z2F6 126 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 BTLAQ7Z6A9 289 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 TPH2Q8IWU9 490 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 NELFCDQ8IXH7 590 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 FAM186BQ8IYM0 893 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 TMEM199Q8N511 208 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 MYCT1Q8N699 235 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 DNERQ8NFT8 737 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 HPS3Q969F9 1004 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 INPP4AQ96PE3 977 aaPredicted RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ACCSQ96QU6 501 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 RMDN3Q96TC7 470 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 CHP1Q99653 195 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 PDCD2LQ9BRP1 358 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 RUSC1Q9BVN2 902 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 LSM14BQ9BX40 385 aaKnown RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 STRA6Q9BX79 667 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 AP5M1Q9H0R1 490 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 GANQ9H2C0 597 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 UNC45AQ9H3U1 944 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ZHX3Q9H4I2 956 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 PXMP2Q9NR77 195 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 HOMER2Q9NSB8 354 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms