RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 ZNF280BQ86YH2 543 aa31.19■■■□□ 2.58
SOD1-203ENST00000470944 URGCPQ8TCY9 931 aa31.19■■■□□ 2.58
SOD1-203ENST00000470944 UBE2OQ9C0C9 1292 aaKnown RBP31.19■■■□□ 2.58
SOD1-203ENST00000470944 GRPEL1Q9HAV7 217 aa31.19■■■□□ 2.58
SOD1-203ENST00000470944 RC3H2Q9HBD1 1191 aaKnown RBP31.19■■■□□ 2.58
SOD1-203ENST00000470944 DPP3Q9NY33 737 aa31.19■■■□□ 2.58
SOD1-203ENST00000470944 UBQLN1Q9UMX0 589 aaKnown RBP31.19■■■□□ 2.58
SOD1-203ENST00000470944 VNN1O95497 513 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 TNNC2P02585 160 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 BIRC3Q13489 604 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 CXorf38Q8TB03 319 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 TAS1R2Q8TE23 839 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 ZNF689Q96CS4 500 aaPredicted RBP31.18■■■□□ 2.58
SOD1-203ENST00000470944 XPO4Q9C0E2 1151 aaKnown RBP31.18■■■□□ 2.58
SOD1-203ENST00000470944 DDHD2O94830 711 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 GJB5O95377 273 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 TPM2P07951 284 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 AP3M2P53677 418 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 MYL7Q01449 175 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 SARM1Q6SZW1 724 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 CACTINQ8WUQ7 758 aaKnown RBP31.18■■■□□ 2.58
SOD1-203ENST00000470944 TSPAN18Q96SJ8 248 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 SIX4Q9UIU6 781 aa31.18■■■□□ 2.58
SOD1-203ENST00000470944 PDCD11Q14690 1871 aaKnown RBP31.17■■■□□ 2.58
SOD1-203ENST00000470944 CST3P01034 146 aaPredicted RBP31.17■■■□□ 2.58
SOD1-203ENST00000470944 ITGB3P05106 788 aa31.17■■■□□ 2.58
SOD1-203ENST00000470944 ATP2A2P16615 1042 aaKnown RBP31.17■■■□□ 2.58
SOD1-203ENST00000470944 NR1I3Q14994 352 aa31.17■■■□□ 2.58
SOD1-203ENST00000470944 HERC6Q8IVU3 1022 aa31.17■■■□□ 2.58
SOD1-203ENST00000470944 BEST2Q8NFU1 509 aa31.17■■■□□ 2.58
SOD1-203ENST00000470944 ELMO3Q96BJ8 720 aa31.17■■■□□ 2.58
SOD1-203ENST00000470944 RNPC3Q96LT9 517 aaKnown RBP31.17■■■□□ 2.58
SOD1-203ENST00000470944 SLC9A7Q96T83 725 aa31.17■■■□□ 2.58
SOD1-203ENST00000470944 PAAF1Q9BRP4 392 aa31.17■■■□□ 2.58
SOD1-203ENST00000470944 CRACR2AQ9BSW2 395 aa31.17■■■□□ 2.58
SOD1-203ENST00000470944 MTIF3Q9H2K0 278 aaKnown RBP31.17■■■□□ 2.58
SOD1-203ENST00000470944 UBXN1Q04323 297 aa31.16■■■□□ 2.58
SOD1-203ENST00000470944 RABGGTAQ92696 567 aa31.16■■■□□ 2.58
SOD1-203ENST00000470944 SEMA4DQ92854 862 aa31.16■■■□□ 2.58
SOD1-203ENST00000470944 SLC38A7Q9NVC3 462 aa31.16■■■□□ 2.58
SOD1-203ENST00000470944 KANSL3Q9P2N6 904 aa31.16■■■□□ 2.58
SOD1-203ENST00000470944 CASTOR2A6NHX0 329 aa31.15■■■□□ 2.58
SOD1-203ENST00000470944 PPEF2O14830 753 aa31.15■■■□□ 2.58
SOD1-203ENST00000470944 RNASELQ05823 741 aaKnown RBP31.15■■■□□ 2.58
SOD1-203ENST00000470944 CYP3A5P20815 502 aa31.15■■■□□ 2.58
SOD1-203ENST00000470944 IGFBP6P24592 240 aaPredicted RBP31.15■■■□□ 2.58
SOD1-203ENST00000470944 DSC1Q08554 894 aa31.15■■■□□ 2.58
SOD1-203ENST00000470944 FILIP1LQ4L180 1135 aa31.15■■■□□ 2.58
SOD1-203ENST00000470944 FAM109BQ6ICB4 259 aaPredicted RBP31.15■■■□□ 2.58
SOD1-203ENST00000470944 PHOSPHO2Q8TCD6 241 aa31.15■■■□□ 2.58
SOD1-203ENST00000470944 YME1L1Q96TA2 773 aa31.15■■■□□ 2.58
SOD1-203ENST00000470944 UTP3Q9NQZ2 479 aaKnown RBP eCLIP31.15■■■□□ 2.58
SOD1-203ENST00000470944 DNAJB4Q9UDY4 337 aa31.15■■■□□ 2.58
SOD1-203ENST00000470944 LAMA3Q16787 3333 aa31.14■■■□□ 2.58
SOD1-203ENST00000470944 PHACTR2O75167 634 aa31.14■■■□□ 2.58
SOD1-203ENST00000470944 KRT19P08727 400 aa31.14■■■□□ 2.58
SOD1-203ENST00000470944 POLR2BP30876 1174 aaKnown RBP31.14■■■□□ 2.58
SOD1-203ENST00000470944 TUSC3Q13454 348 aa31.14■■■□□ 2.58
SOD1-203ENST00000470944 ITGA11Q9UKX5 1188 aa31.14■■■□□ 2.58
SOD1-203ENST00000470944 COQ4Q9Y3A0 265 aa31.14■■■□□ 2.58
SOD1-203ENST00000470944 FNDC1Q4ZHG4 1894 aaPredicted RBP31.14■■■□□ 2.58
SOD1-203ENST00000470944 PMM2O15305 246 aa31.13■■■□□ 2.57
SOD1-203ENST00000470944 XPOTO43592 962 aaKnown RBP31.13■■■□□ 2.57
SOD1-203ENST00000470944 HLA-DRAP01903 254 aa31.13■■■□□ 2.57
SOD1-203ENST00000470944 HTRA4P83105 476 aaPredicted RBP31.13■■■□□ 2.57
SOD1-203ENST00000470944 KCNMA1Q12791 1236 aa31.13■■■□□ 2.57
SOD1-203ENST00000470944 NCOA4Q13772 614 aa31.13■■■□□ 2.57
SOD1-203ENST00000470944 EPC2Q52LR7 807 aa31.13■■■□□ 2.57
SOD1-203ENST00000470944 C9orf57Q5W0N0 161 aa31.13■■■□□ 2.57
SOD1-203ENST00000470944 LRRC43Q8N309 656 aa31.13■■■□□ 2.57
SOD1-203ENST00000470944 FBXL13Q8NEE6 735 aa31.13■■■□□ 2.57
SOD1-203ENST00000470944 ZBED2Q9BTP6 218 aa31.13■■■□□ 2.57
SOD1-203ENST00000470944 MRPL9Q9BYD2 267 aaKnown RBP31.13■■■□□ 2.57
SOD1-203ENST00000470944 TRIM5Q9C035 493 aa31.13■■■□□ 2.57
SOD1-203ENST00000470944 NRDE2Q9H7Z3 1164 aa31.13■■■□□ 2.57
SOD1-203ENST00000470944 N4BP1O75113 896 aaKnown RBP31.12■■■□□ 2.57
SOD1-203ENST00000470944 KLK7P49862 253 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 CLCNKBP51801 687 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 MLLT1Q03111 559 aaPredicted RBP31.12■■■□□ 2.57
SOD1-203ENST00000470944 FKBP15Q5T1M5 1219 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 COLGALT2Q8IYK4 626 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 LMO3Q8TAP4 145 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 PI4K2AQ9BTU6 479 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 GCNT4Q9P109 453 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 AGAP1Q9UPQ3 857 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 ANO9A1A5B4 782 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 GRXCR1A8MXD5 290 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 P4HA2O15460 535 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 LRPAP1P30533 357 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 PIK3CAP42336 1068 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 MYL6P60660 151 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 APBA1Q02410 837 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 RAB20Q9NX57 234 aa31.12■■■□□ 2.57
SOD1-203ENST00000470944 TDRD15B5MCY1 1934 aaKnown RBP31.11■■■□□ 2.57
SOD1-203ENST00000470944 F8W810 466 aa31.11■■■□□ 2.57
SOD1-203ENST00000470944 SLC9A1P19634 815 aa31.11■■■□□ 2.57
SOD1-203ENST00000470944 BTG3Q14201 252 aaPredicted RBP31.11■■■□□ 2.57
SOD1-203ENST00000470944 RSPH1Q8WYR4 309 aa31.11■■■□□ 2.57
SOD1-203ENST00000470944 PDE4DIPQ5VU43 2346 aa31.11■■■□□ 2.57
SOD1-203ENST00000470944 GTPBP10A4D1E9 387 aaKnown RBP31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms