RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 LRRC34Q8IZ02 419 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 PPM1NQ8N819 430 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 LPAR1Q92633 364 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 FAM149B1Q96BN6 582 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 TSSK1BQ9BXA7 367 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 DONSONQ9NYP3 566 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 EHD2Q9NZN4 543 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 GABBR1Q9UBS5 961 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 DCTN4Q9UJW0 460 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 AP3B1O00203 1094 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 ECE2O60344 883 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 NQO1P15559 274 aaKnown RBP11.12□□□□□ -0.63
RRP1B-202ENST00000470886 TAC1P20366 129 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 SDC4P31431 198 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 PGM1P36871 562 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 SREBF1P36956 1147 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 ITGA8P53708 1063 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 PDE1CQ14123 709 aaPredicted RBP11.12□□□□□ -0.63
RRP1B-202ENST00000470886 KLC3Q6P597 504 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 TMEM139Q8IV31 216 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 BBS5Q8N3I7 341 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 SCFD1Q8WVM8 642 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 PSPC1Q8WXF1 523 aaKnown RBP11.12□□□□□ -0.63
RRP1B-202ENST00000470886 THOC1Q96FV9 657 aaKnown RBP11.12□□□□□ -0.63
RRP1B-202ENST00000470886 FAM163AQ96GL9 167 aaPredicted RBP11.12□□□□□ -0.63
RRP1B-202ENST00000470886 FAM161BQ96MY7 647 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 LRRC4Q9HBW1 653 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 ZNF302Q9NR11 478 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 HOXC10Q9NYD6 342 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 SIK3Q9Y2K2 1263 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 COL18A1P39060 1754 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 BCAR1P56945 870 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 AMPD2Q01433 879 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 TAF12Q16514 161 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 DAB2IPQ5VWQ8 1189 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 PASD1Q8IV76 773 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 EHD4Q9H223 541 aa11.12□□□□□ -0.63
RRP1B-202ENST00000470886 TDRD3Q9H7E2 651 aaKnown RBP11.12□□□□□ -0.63
RRP1B-202ENST00000470886 NGRNQ9NPE2 291 aaKnown RBP11.12□□□□□ -0.63
RRP1B-202ENST00000470886 CREB3O43889 395 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 XKR3Q5GH77 459 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 ZNF571Q7Z3V5 609 aaPredicted RBP11.11□□□□□ -0.63
RRP1B-202ENST00000470886 MXRA8Q9BRK3 442 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 PAGR1Q9BTK6 254 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 YIPF3Q9GZM5 350 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 MAP3K20Q9NYL2 800 aaKnown RBP11.11□□□□□ -0.63
RRP1B-202ENST00000470886 IL1R1P14778 569 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 PRKCIP41743 596 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 PHKA2P46019 1235 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 EZH2Q15910 746 aaKnown RBP11.11□□□□□ -0.63
RRP1B-202ENST00000470886 KYNUQ16719 465 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.11□□□□□ -0.63
RRP1B-202ENST00000470886 EARS2Q5JPH6 523 aaKnown RBP11.11□□□□□ -0.63
RRP1B-202ENST00000470886 LONP2Q86WA8 852 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 ATXN2LQ8WWM7 1075 aaKnown RBP11.11□□□□□ -0.63
RRP1B-202ENST00000470886 PPWD1Q96BP3 646 aaKnown RBP11.11□□□□□ -0.63
RRP1B-202ENST00000470886 ARHGEF26Q96DR7 871 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 THAP2Q9H0W7 228 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 PRR12Q9ULL5 1215 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 SUFUQ9UMX1 484 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 AKT3Q9Y243 479 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 PAMP19021 973 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 MFSD4BQ5TF39 518 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 SPOPLQ6IQ16 392 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 C1orf131Q8NDD1 294 aaKnown RBP11.11□□□□□ -0.63
RRP1B-202ENST00000470886 ERP27Q96DN0 273 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 VPS39Q96JC1 886 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 TRIM56Q9BRZ2 755 aaKnown RBP11.11□□□□□ -0.63
RRP1B-202ENST00000470886 RNF146Q9NTX7 359 aa11.11□□□□□ -0.63
RRP1B-202ENST00000470886 ATP8B3O60423 1300 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 IGF2BP3O00425 579 aaKnown RBP eCLIP11.1□□□□□ -0.636e-7■■■□□ 17.1
RRP1B-202ENST00000470886 WDR46O15213 610 aaKnown RBP11.1□□□□□ -0.63
RRP1B-202ENST00000470886 SYF2O95926 243 aaKnown RBP11.1□□□□□ -0.63
RRP1B-202ENST00000470886 ACADSP16219 412 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 KCNQ4P56696 695 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 HIC1Q14526 733 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 CCDC92Q53HC0 331 aaPredicted RBP11.1□□□□□ -0.63
RRP1B-202ENST00000470886 SCARA5Q6ZMJ2 495 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 RHPN2Q8IUC4 686 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 NRBF2Q96F24 287 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 PPP1R12AO14974 1030 aaPredicted RBP11.1□□□□□ -0.63
RRP1B-202ENST00000470886 NVLO15381 856 aaKnown RBP11.1□□□□□ -0.63
RRP1B-202ENST00000470886 KLHL2O95198 593 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 EIF3EP60228 445 aaKnown RBP11.1□□□□□ -0.63
RRP1B-202ENST00000470886 TKFCQ3LXA3 575 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 CDC42EP5Q6NZY7 148 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 SIX6OS1Q8N1H7 587 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 DNAJC9Q8WXX5 260 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 HDAC11Q96DB2 347 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 FGD4Q96M96 766 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 SLC4A9Q96Q91 983 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 AFG3L2Q9Y4W6 797 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 MSH4O15457 936 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 OSBPP22059 807 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 MCL1Q07820 350 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 MAPRE2Q15555 327 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 HEATR6Q6AI08 1181 aaKnown RBP11.1□□□□□ -0.63
RRP1B-202ENST00000470886 JADE1Q6IE81 842 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 MIGA2Q7L4E1 593 aa11.1□□□□□ -0.63
RRP1B-202ENST00000470886 TMC3Q7Z5M5 1100 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms