RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 C18orf25Q96B23 403 aaPredicted RBP13.67□□□□□ -0.22
SND1-209ENST00000470723 FAM212AQ96EL1 285 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 KIF12Q96FN5 646 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 EEF2KMTQ96G04 330 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 LRCH3Q96II8 777 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 POP1Q99575 1024 aaKnown RBP13.67□□□□□ -0.22
SND1-209ENST00000470723 CGRRF1Q99675 332 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 COLEC11Q9BWP8 271 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 DNAJC25Q9H1X3 360 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 NKX2-4Q9H2Z4 354 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 DPP3Q9NY33 737 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 ARMCX3Q9UH62 379 aaPredicted RBP13.67□□□□□ -0.22
SND1-209ENST00000470723 STXBP5LQ9Y2K9 1186 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 FAN1Q9Y2M0 1017 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 PCDHB12Q9Y5F1 795 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 TRANK1O15050 2925 aa13.67□□□□□ -0.22
SND1-209ENST00000470723 LRRIQ3A6PVS8 624 aaPredicted RBP13.66□□□□□ -0.22
SND1-209ENST00000470723 SOX1O00570 391 aaPredicted RBP13.66□□□□□ -0.22
SND1-209ENST00000470723 KRT13P13646 458 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 PRKCSHP14314 528 aaPredicted RBP13.66□□□□□ -0.22
SND1-209ENST00000470723 SLC11A1P49279 550 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 DLG4P78352 724 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 SPAG1Q07617 926 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 BFSP1Q12934 665 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 IQCB1Q15051 598 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 EPC2Q52LR7 807 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 LRSAM1Q6UWE0 723 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 TRAPPC11Q7Z392 1133 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 TRIM59Q8IWR1 403 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 SLC39A11Q8N1S5 342 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 OR5B17Q8NGF7 314 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 CCDC127Q96BQ5 260 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 IGSF21Q96ID5 467 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 ZNF558Q96NG5 402 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 FNBP1Q96RU3 617 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 PAAF1Q9BRP4 392 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 HSD3B7Q9H2F3 369 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 SPG21Q9NZD8 308 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 HCSTQ9UBK5 93 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 STK39Q9UEW8 545 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 LZTS1Q9Y250 596 aa13.66□□□□□ -0.22
SND1-209ENST00000470723 PTPRJQ12913 1337 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 H3BNC9 293 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 DLATP10515 647 aaKnown RBP13.65□□□□□ -0.22
SND1-209ENST00000470723 TNNI1P19237 187 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 PPM1AP35813 382 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 AARSP49588 968 aaKnown RBP eCLIP13.65□□□□□ -0.22
SND1-209ENST00000470723 ZNF165P49910 485 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 CLCNKBP51801 687 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 RBP5P82980 135 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 TFAMQ00059 246 aaKnown RBP13.65□□□□□ -0.22
SND1-209ENST00000470723 ZACNQ401N2 412 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 CDKAL1Q5VV42 579 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 C9orf57Q5W0N0 161 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 SV2AQ7L0J3 742 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 DDX53Q86TM3 631 aaKnown RBP13.65□□□□□ -0.22
SND1-209ENST00000470723 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.65□□□□□ -0.22
SND1-209ENST00000470723 DHX40Q8IX18 779 aaKnown RBP13.65□□□□□ -0.22
SND1-209ENST00000470723 GPR65Q8IYL9 337 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 RNF168Q8IYW5 571 aaPredicted RBP13.65□□□□□ -0.22
SND1-209ENST00000470723 C1orf127Q8N9H9 656 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 SPPL3Q8TCT6 385 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 SLC35C1Q96A29 364 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 C17orf80Q9BSJ5 609 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 ZNF576Q9H609 170 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 MARCH5Q9NX47 278 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 TUBGCP4Q9UGJ1 667 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 SIX4Q9UIU6 781 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 ITGA11Q9UKX5 1188 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 COQ4Q9Y3A0 265 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 NFE2L3Q9Y4A8 694 aa13.65□□□□□ -0.22
SND1-209ENST00000470723 SZT2Q5T011 3432 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 SMTNL1A8MU46 457 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 STX10O60499 249 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 ZC3H11AO75152 810 aaKnown RBP eCLIP13.64□□□□□ -0.23
SND1-209ENST00000470723 STAU1O95793 577 aaKnown RBP13.64□□□□□ -0.23
SND1-209ENST00000470723 CST3P01034 146 aaPredicted RBP13.64□□□□□ -0.23
SND1-209ENST00000470723 ZNF18P17022 549 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 IGFBP6P24592 240 aaPredicted RBP13.64□□□□□ -0.23
SND1-209ENST00000470723 OR1G1P47890 313 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 LILRA4P59901 499 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 MYL5Q02045 173 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 UBE3AQ05086 875 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 PPP3CAQ08209 521 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 PPP2R2DQ66LE6 453 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 FAM114A1Q8IWE2 563 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 LRRC52Q8N7C0 313 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 KLHL23Q8NBE8 558 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 ANKRD36BP1Q96IX9 119 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 VRTNQ9H8Y1 702 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 SAMSN1Q9NSI8 373 aaKnown RBP13.64□□□□□ -0.23
SND1-209ENST00000470723 FANCLQ9NW38 375 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 SCN1AP35498 2009 aa13.64□□□□□ -0.23
SND1-209ENST00000470723 NLRC5Q86WI3 1866 aa13.63□□□□□ -0.23
SND1-209ENST00000470723 KIAA1671Q9BY89 1806 aa13.63□□□□□ -0.23
SND1-209ENST00000470723 CASTOR2A6NHX0 329 aa13.63□□□□□ -0.23
SND1-209ENST00000470723 PODXLO00592 558 aa13.63□□□□□ -0.23
SND1-209ENST00000470723 P4HA2O15460 535 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms