RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 MPLP40238 635 aa7.18□□□□□ -1.26
COL11A1-208ENST00000470170 NOMO3P69849 1222 aa7.18□□□□□ -1.26
COL11A1-208ENST00000470170 NOMO2Q5JPE7 1267 aa7.18□□□□□ -1.26
COL11A1-208ENST00000470170 ADGRG3Q86Y34 549 aa7.18□□□□□ -1.26
COL11A1-208ENST00000470170 MARS2Q96GW9 593 aaKnown RBP7.18□□□□□ -1.26
COL11A1-208ENST00000470170 BBC3Q96PG8 261 aaPredicted RBP7.18□□□□□ -1.26
COL11A1-208ENST00000470170 KCNE5Q9UJ90 142 aa7.18□□□□□ -1.26
COL11A1-208ENST00000470170 SALL3Q9BXA9 1300 aa7.18□□□□□ -1.26
COL11A1-208ENST00000470170 ALAS1P13196 640 aa7.17□□□□□ -1.26
COL11A1-208ENST00000470170 CXCR5P32302 372 aa7.17□□□□□ -1.26
COL11A1-208ENST00000470170 PTH2RP49190 550 aa7.17□□□□□ -1.26
COL11A1-208ENST00000470170 PRR16Q569H4 304 aa7.17□□□□□ -1.26
COL11A1-208ENST00000470170 CBARPQ8N350 705 aaPredicted RBP7.17□□□□□ -1.26
COL11A1-208ENST00000470170 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.17□□□□□ -1.26
COL11A1-208ENST00000470170 BOD1Q96IK1 185 aa7.17□□□□□ -1.26
COL11A1-208ENST00000470170 GALNT9Q9HCQ5 603 aa7.17□□□□□ -1.26
COL11A1-208ENST00000470170 TMEM74BQ9NUR3 256 aa7.17□□□□□ -1.26
COL11A1-208ENST00000470170 HSFX1Q9UBD0 423 aa7.17□□□□□ -1.26
COL11A1-208ENST00000470170 TUBD1Q9UJT1 453 aa7.17□□□□□ -1.26
COL11A1-208ENST00000470170 MTO1Q9Y2Z2 717 aaKnown RBP7.17□□□□□ -1.26
COL11A1-208ENST00000470170 MAST3O60307 1309 aa7.17□□□□□ -1.26
COL11A1-208ENST00000470170 MT-CO1P00395 513 aa7.16□□□□□ -1.26
COL11A1-208ENST00000470170 CYP2A13Q16696 494 aa7.16□□□□□ -1.26
COL11A1-208ENST00000470170 INAVAQ3KP66 663 aa7.16□□□□□ -1.26
COL11A1-208ENST00000470170 PGM2L1Q6PCE3 622 aa7.16□□□□□ -1.26
COL11A1-208ENST00000470170 FOXR2Q6PJQ5 311 aa7.16□□□□□ -1.26
COL11A1-208ENST00000470170 FAM43AQ8N2R8 423 aa7.16□□□□□ -1.26
COL11A1-208ENST00000470170 FITM2Q8N6M3 262 aa7.16□□□□□ -1.26
COL11A1-208ENST00000470170 DCBLD1Q8N8Z6 715 aa7.16□□□□□ -1.26
COL11A1-208ENST00000470170 NTN5Q8WTR8 489 aaPredicted RBP7.16□□□□□ -1.26
COL11A1-208ENST00000470170 JADE3Q92613 823 aa7.16□□□□□ -1.26
COL11A1-208ENST00000470170 FUBP1Q96AE4 644 aaKnown RBP7.16□□□□□ -1.26
COL11A1-208ENST00000470170 ZNF764Q96H86 408 aaPredicted RBP7.16□□□□□ -1.26
COL11A1-208ENST00000470170 PUS7LQ9H0K6 701 aaKnown RBP7.16□□□□□ -1.26
COL11A1-208ENST00000470170 R3HDMLQ9H3Y0 253 aa7.16□□□□□ -1.26
COL11A1-208ENST00000470170 PTGFRNQ9P2B2 879 aa7.16□□□□□ -1.26
COL11A1-208ENST00000470170 ERN1O75460 977 aaKnown RBP7.15□□□□□ -1.26
COL11A1-208ENST00000470170 ZFPL1O95159 310 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 CREMQ03060 361 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 SLFN5Q08AF3 891 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 TARDBPQ13148 414 aaKnown RBP eCLIP7.15□□□□□ -1.26
COL11A1-208ENST00000470170 ACAP2Q15057 778 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 DACT2Q5SW24 774 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 NECAB2Q7Z6G3 386 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 SIMC1Q8NDZ2 872 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 C1orf162Q8NEQ5 155 aaPredicted RBP7.15□□□□□ -1.26
COL11A1-208ENST00000470170 TBC1D15Q8TC07 691 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 C11orf54Q9H0W9 315 aaPredicted RBP7.15□□□□□ -1.26
COL11A1-208ENST00000470170 TMX1Q9H3N1 280 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 SPC25Q9HBM1 224 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 CASS4Q9NQ75 786 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 TBCCD1Q9NVR7 557 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 ATP8A1Q9Y2Q0 1164 aa7.15□□□□□ -1.26
COL11A1-208ENST00000470170 NDUFS2O75306 463 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 C5AR1P21730 350 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 SLC6A4P31645 630 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 CTXN1P60606 82 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 GEN1Q17RS7 908 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 ERCC6LQ2NKX8 1250 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 Q6ZNX1 250 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 RD3Q7Z3Z2 195 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 NUP133Q8WUM0 1156 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 SSH1Q8WYL5 1049 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 PCSK5Q92824 1860 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 TMX3Q96JJ7 454 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 UNKLQ9H9P5 680 aaKnown RBP7.14□□□□□ -1.27
COL11A1-208ENST00000470170 ALG13Q9NP73 1137 aaKnown RBP7.14□□□□□ -1.27
COL11A1-208ENST00000470170 MKS1Q9NXB0 559 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 PCDHA13Q9Y5I0 950 aa7.14□□□□□ -1.27
COL11A1-208ENST00000470170 FCER1AP12319 257 aa7.13□□□□□ -1.27
COL11A1-208ENST00000470170 FBLP22087 321 aaKnown RBP7.13□□□□□ -1.27
COL11A1-208ENST00000470170 WASP42768 502 aa7.13□□□□□ -1.27
COL11A1-208ENST00000470170 VAV2P52735 878 aa7.13□□□□□ -1.27
COL11A1-208ENST00000470170 ABCB5Q2M3G0 1257 aa7.13□□□□□ -1.27
COL11A1-208ENST00000470170 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.13□□□□□ -1.27
COL11A1-208ENST00000470170 MIGA2Q7L4E1 593 aa7.13□□□□□ -1.27
COL11A1-208ENST00000470170 RSPH3Q86UC2 560 aa7.13□□□□□ -1.27
COL11A1-208ENST00000470170 PTCD3Q96EY7 689 aaKnown RBP7.13□□□□□ -1.27
COL11A1-208ENST00000470170 PNKPQ96T60 521 aa7.13□□□□□ -1.27
COL11A1-208ENST00000470170 TDP1Q9NUW8 608 aa7.13□□□□□ -1.27
COL11A1-208ENST00000470170 SAP30BPQ9UHR5 308 aaKnown RBP7.13□□□□□ -1.27
COL11A1-208ENST00000470170 INSL6Q9Y581 213 aa7.13□□□□□ -1.27
COL11A1-208ENST00000470170 SPATA31A6Q5VVP1 1343 aa7.12□□□□□ -1.27
COL11A1-208ENST00000470170 SBK3P0C264 359 aa7.12□□□□□ -1.27
COL11A1-208ENST00000470170 ATP2B3Q16720 1220 aa7.12□□□□□ -1.27
COL11A1-208ENST00000470170 FBXO42Q6P3S6 717 aa7.12□□□□□ -1.27
COL11A1-208ENST00000470170 RSAD1Q9HA92 442 aa7.12□□□□□ -1.27
COL11A1-208ENST00000470170 MASP2O00187 686 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 GRM6O15303 877 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 XPOTO43592 962 aaKnown RBP7.11□□□□□ -1.27
COL11A1-208ENST00000470170 PCDHGA12O60330 932 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 HAUS5O94927 633 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 MYBL2P10244 700 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 CDC42EP1Q00587 391 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 ZNF169Q14929 603 aaPredicted RBP7.11□□□□□ -1.27
COL11A1-208ENST00000470170 CCDC142Q17RM4 750 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 NLGN4YQ8NFZ3 816 aaPredicted RBP7.11□□□□□ -1.27
COL11A1-208ENST00000470170 IFI44Q8TCB0 444 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 SLC9A6Q92581 669 aa7.11□□□□□ -1.27
COL11A1-208ENST00000470170 VOPP1Q96AW1 172 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms