RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 HOMER2Q9NSB8 354 aa14.55□□□□□ -0.08
BRCA1-209ENST00000470026 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.55□□□□□ -0.08
BRCA1-209ENST00000470026 WNT10BO00744 389 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 EXTL3O43909 919 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 C4BPAP04003 597 aaKnown RBP14.54□□□□□ -0.08
BRCA1-209ENST00000470026 KCNA2P16389 499 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 SNX1Q13596 522 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 WLSQ5T9L3 541 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 ARHGEF16Q5VV41 709 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 TRIM72Q6ZMU5 477 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 TRPM8Q7Z2W7 1104 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 CCDC91Q7Z6B0 441 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 LARGE2Q8N3Y3 721 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 ATG4AQ8WYN0 398 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 ATP6V0A1Q93050 837 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 ELMO3Q96BJ8 720 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 FAM212AQ96EL1 285 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 VCPIP1Q96JH7 1222 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 TEPSINQ96N21 525 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 EURLQ9NYK6 297 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 GABBR1Q9UBS5 961 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 TCEAL9Q9UHQ7 104 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 TPX2Q9ULW0 747 aaKnown RBP14.54□□□□□ -0.08
BRCA1-209ENST00000470026 CNTN6Q9UQ52 1028 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 R3HDM2Q9Y2K5 976 aaKnown RBP14.54□□□□□ -0.08
BRCA1-209ENST00000470026 SIP14410 1827 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 TMEM120BA0PK00 339 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 H0YCG3 227 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 HNRNPDLO14979 420 aaKnown RBP14.54□□□□□ -0.08
BRCA1-209ENST00000470026 ACSL3O95573 720 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 CALCAP01258 141 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 VIMP08670 466 aaKnown RBP14.54□□□□□ -0.08
BRCA1-209ENST00000470026 SOX10P56693 466 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 SNCBQ16143 134 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 PREPLQ4J6C6 727 aaPredicted RBP14.54□□□□□ -0.08
BRCA1-209ENST00000470026 CCDC38Q502W7 563 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 NLRX1Q86UT6 975 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 KATNAL2Q8IYT4 538 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 BBOF1Q8ND07 529 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 CPA5Q8WXQ8 436 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 FAM213AQ9BRX8 229 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 CD248Q9HCU0 757 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 NINJ2Q9NZG7 142 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 NFASCO94856 1347 aa14.54□□□□□ -0.08
BRCA1-209ENST00000470026 KIAA1217Q5T5P2 1943 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 TESPA1A2RU30 521 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-209ENST00000470026 ATF2P15336 505 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 CCND2P30279 289 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 NOMO3P69849 1222 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 NBPF9Q3BBW0 867 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 PLEKHA7Q6IQ23 1121 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 PHF13Q86YI8 300 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-209ENST00000470026 CKAP2Q8WWK9 683 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 ACTL7BQ9Y614 415 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 TNS1Q9HBL0 1735 aaKnown RBP14.53□□□□□ -0.08
BRCA1-209ENST00000470026 VWA5AO00534 786 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 ZBED4O75132 1171 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 RGS20O76081 388 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 PIGRP01833 764 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 HLA-DRAP01903 254 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 NR3C2P08235 984 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 CREB1P16220 341 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 NSFP46459 744 aaKnown RBP14.53□□□□□ -0.08
BRCA1-209ENST00000470026 IFNAR2P48551 515 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 ELF3P78545 371 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-209ENST00000470026 DGKZQ13574 1117 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 GALNTL6Q49A17 601 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 RHOT1Q8IXI2 618 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 NCAPGQ9BPX3 1015 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 TACO1Q9BSH4 297 aaKnown RBP14.53□□□□□ -0.08
BRCA1-209ENST00000470026 FOXP3Q9BZS1 431 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 ZNF277Q9NRM2 450 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-209ENST00000470026 ANAPC5Q9UJX4 755 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 ZNRF3Q9ULT6 936 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 RLFQ13129 1914 aa14.53□□□□□ -0.08
BRCA1-209ENST00000470026 CFAP73A6NFT4 308 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 VNN1O95497 513 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 ABHD2P08910 425 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 RALAP11233 206 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 KLRC2P26717 231 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 DSG3P32926 999 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 WNT7BP56706 349 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 TAS2R40P59535 323 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 MAMLD1Q13495 774 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 BAATQ14032 418 aaPredicted RBP14.52□□□□□ -0.09
BRCA1-209ENST00000470026 LLGL1Q15334 1064 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 KYNUQ16719 465 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 TDRD10Q5VZ19 366 aaKnown RBP14.52□□□□□ -0.09
BRCA1-209ENST00000470026 PPP1R2P3Q6NXS1 205 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 TRMT1LQ7Z2T5 733 aaKnown RBP14.52□□□□□ -0.09
BRCA1-209ENST00000470026 RPAINQ86UA6 219 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 ABRAQ8N0Z2 381 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 TTLL6Q8N841 843 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 CCDC89Q8N998 374 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 REPS2Q8NFH8 660 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 EXD1Q8NHP7 514 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 ATP6V0A4Q9HBG4 840 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 CYP26B1Q9NR63 512 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 KCNG1Q9UIX4 513 aa14.52□□□□□ -0.09
BRCA1-209ENST00000470026 USP15Q9Y4E8 981 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms