RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 TAF1P21675 1872 aa5.98□□□□□ -1.45
VPS8-219ENST00000469479 CLSPNQ9HAW4 1339 aa5.98□□□□□ -1.45
VPS8-219ENST00000469479 PRUNE2Q8WUY3 3088 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 A0A0G2JNJ9 132 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.97□□□□□ -1.45
VPS8-219ENST00000469479 BTBD19C9JJ37 291 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 ADCY3O60266 1144 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 ATF4P18848 351 aaPredicted RBP5.97□□□□□ -1.45
VPS8-219ENST00000469479 GJA4P35212 333 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 PTGS2P35354 604 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 CCT4P50991 539 aaKnown RBP5.97□□□□□ -1.45
VPS8-219ENST00000469479 PPIL2Q13356 520 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 NFE2L2Q16236 605 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 PROSER3Q2NL68 480 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 DPH6Q7L8W6 267 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 OTOP2Q7RTS6 562 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 ANKRD23Q86SG2 305 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 OR14K1Q8NGZ2 314 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS8-219ENST00000469479 MAFAQ8NHW3 353 aaPredicted RBP5.97□□□□□ -1.45
VPS8-219ENST00000469479 SH3RF2Q8TEC5 729 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 TMEM176AQ96HP8 235 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 PARK7Q99497 189 aaKnown RBP5.97□□□□□ -1.45
VPS8-219ENST00000469479 ALG1Q9BT22 464 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 VEZTQ9HBM0 779 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 HYPKQ9NX55 129 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 HECAQ9UBI9 543 aaPredicted RBP5.97□□□□□ -1.45
VPS8-219ENST00000469479 DBF4Q9UBU7 674 aaPredicted RBP5.97□□□□□ -1.45
VPS8-219ENST00000469479 Q9UFV3 132 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 PRKAG3Q9UGI9 489 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 CDC42EP3Q9UKI2 254 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 MAPK8IP3Q9UPT6 1336 aa5.97□□□□□ -1.45
VPS8-219ENST00000469479 FAM90A27PA6NNH2 459 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 KRTAP29-1A8MX34 341 aaPredicted RBP5.96□□□□□ -1.46
VPS8-219ENST00000469479 PCCAP05165 728 aaPredicted RBP5.96□□□□□ -1.46
VPS8-219ENST00000469479 MRPS21P82921 87 aaKnown RBP5.96□□□□□ -1.46
VPS8-219ENST00000469479 HDLBPQ00341 1268 aaKnown RBP5.96□□□□□ -1.46
VPS8-219ENST00000469479 PPATQ06203 517 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 CNGB1Q14028 1251 aaPredicted RBP5.96□□□□□ -1.46
VPS8-219ENST00000469479 CFAP100Q494V2 611 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 CCDC191Q8NCU4 936 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 SGSM3Q96HU1 749 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 PAWRQ96IZ0 340 aaKnown RBP5.96□□□□□ -1.46
VPS8-219ENST00000469479 GUCD1Q96NT3 240 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 DEFB118Q96PH6 123 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 IPPKQ9H8X2 491 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 GPRC5BQ9NZH0 403 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 FZD1Q9UP38 647 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 SRPK3Q9UPE1 567 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 MRVI1Q9Y6F6 885 aa5.96□□□□□ -1.46
VPS8-219ENST00000469479 COL2A1P02458 1487 aaPredicted RBP5.96□□□□□ -1.46
VPS8-219ENST00000469479 TCRBV5S4A2TA0A5A2 114 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 CLRN2A0PK11 232 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 NUDT3O95989 172 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 IGHMBP2P38935 993 aaKnown RBP5.95□□□□□ -1.46
VPS8-219ENST00000469479 KCNJ4P48050 445 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 RBM5P52756 815 aaKnown RBP eCLIP5.95□□□□□ -1.46
VPS8-219ENST00000469479 SLC25A3Q00325 362 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 PRKCZQ05513 592 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 EP400NLQ6ZTU2 488 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 C15orf52Q6ZUT6 534 aaKnown RBP5.95□□□□□ -1.46
VPS8-219ENST00000469479 ZNF804AQ7Z570 1209 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 HAS1Q92839 578 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 LBHD1Q9BQE6 289 aaPredicted RBP5.95□□□□□ -1.46
VPS8-219ENST00000469479 MXD3Q9BW11 206 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 TGIF2Q9GZN2 237 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 NRDE2Q9H7Z3 1164 aa5.95□□□□□ -1.46
VPS8-219ENST00000469479 AGO3Q9H9G7 860 aaKnown RBP5.95□□□□□ -1.46
VPS8-219ENST00000469479 ZMYND8Q9ULU4 1186 aaPredicted RBP5.95□□□□□ -1.46
VPS8-219ENST00000469479 MUC3AQ02505 3323 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 PDHXO00330 501 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 TNPO2O14787 897 aaKnown RBP5.94□□□□□ -1.46
VPS8-219ENST00000469479 GJB6O95452 261 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 ANXA1P04083 346 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 SSBP05455 408 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS8-219ENST00000469479 FGFR1P11362 822 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 AOAHP28039 575 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 HERVK_113P62684 666 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 RIN1Q13671 783 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 GPR19Q15760 415 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 TMEM200BQ69YZ2 307 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 ARHGAP36Q6ZRI8 547 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 RABGGTAQ92696 567 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 COA7Q96BR5 231 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 MIEF2Q96C03 454 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 C1QTNF1Q9BXJ1 281 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS8-219ENST00000469479 C11orf49Q9H6J7 331 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 CWC25Q9NXE8 425 aaPredicted RBP5.94□□□□□ -1.46
VPS8-219ENST00000469479 TMOD2Q9NZR1 351 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 PTGFRNQ9P2B2 879 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 CHPF2Q9P2E5 772 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 CPA4Q9UI42 421 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 FAM184BQ9ULE4 1060 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 SLC45A1Q9Y2W3 748 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 SH3BP1Q9Y3L3 701 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 ATP23Q9Y6H3 246 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 COL4A1P02462 1669 aa5.94□□□□□ -1.46
VPS8-219ENST00000469479 DDX58O95786 925 aaKnown RBP5.93□□□□□ -1.46
VPS8-219ENST00000469479 LMNAP02545 664 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms