RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 GSTCDQ8NEC7 633 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 RSPH1Q8WYR4 309 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 NUP58Q9BVL2 599 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 IFIH1Q9BYX4 1025 aaKnown RBP8.83□□□□□ -1
NPHP3-204ENST00000469232 NXF3Q9H4D5 531 aaKnown RBP8.83□□□□□ -1
NPHP3-204ENST00000469232 TOPORSQ9NS56 1045 aaPredicted RBP8.83□□□□□ -1
NPHP3-204ENST00000469232 C1orf112Q9NSG2 853 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 SNTG2Q9NY99 539 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 MYO6Q9UM54 1294 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 CAPN11Q9UMQ6 739 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 GIT1Q9Y2X7 761 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 LTBP2Q14767 1821 aa8.83□□□□□ -1
NPHP3-204ENST00000469232 TET1Q8NFU7 2136 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 TRIM43BA6NCK2 446 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 SMAPO00193 183 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 RECQL4O94761 1208 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 VNN1O95497 513 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 GYPCP04921 128 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 RFX1P22670 979 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 GCLMP48507 274 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 NAB2Q15742 525 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 DUOXA2Q1HG44 320 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 TCTN1Q2MV58 587 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 SEZ6Q53EL9 994 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 KLHDC7AQ5VTJ3 777 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 TDRD10Q5VZ19 366 aaKnown RBP8.82□□□□□ -1
NPHP3-204ENST00000469232 TWF2Q6IBS0 349 aaKnown RBP8.82□□□□□ -1
NPHP3-204ENST00000469232 AGMOQ6ZNB7 445 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 SLC24A5Q71RS6 500 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 ECHDC2Q86YB7 292 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 DBF4BQ8NFT6 615 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 OR5B17Q8NGF7 314 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 BAP1Q92560 729 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 ANP32BQ92688 251 aaKnown RBP8.82□□□□□ -1
NPHP3-204ENST00000469232 TRIM43Q96BQ3 446 aaPredicted RBP8.82□□□□□ -1
NPHP3-204ENST00000469232 CCDC127Q96BQ5 260 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 ZMAT2Q96NC0 199 aaKnown RBP8.82□□□□□ -1
NPHP3-204ENST00000469232 PPP1R10Q96QC0 940 aaKnown RBP8.82□□□□□ -1
NPHP3-204ENST00000469232 POP1Q99575 1024 aaKnown RBP8.82□□□□□ -1
NPHP3-204ENST00000469232 ADAM2Q99965 735 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 UBN1Q9NPG3 1134 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 RNF19AQ9NV58 838 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 TMEM39AQ9NV64 488 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 SIX4Q9UIU6 781 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.82□□□□□ -1
NPHP3-204ENST00000469232 TTC3P53804 2025 aa8.82□□□□□ -1
NPHP3-204ENST00000469232 ANO9A1A5B4 782 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 RNF225M0QZC1 329 aaPredicted RBP8.81□□□□□ -1
NPHP3-204ENST00000469232 ENPP3O14638 875 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 PTGESO14684 152 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 EPHB6O15197 1021 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 ASS1P00966 412 aaKnown RBP8.81□□□□□ -1
NPHP3-204ENST00000469232 PFKMP08237 780 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 ZSCAN20P17040 1043 aaPredicted RBP8.81□□□□□ -1
NPHP3-204ENST00000469232 ITGB8P26012 769 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 LRPAP1P30533 357 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 CYP2C18P33260 490 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 MATR3P43243 847 aaKnown RBP eCLIP8.81□□□□□ -1
NPHP3-204ENST00000469232 JAM2P57087 298 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 GSDMDP57764 484 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 MYL7Q01449 175 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 NFX1Q12986 1120 aaKnown RBP8.81□□□□□ -1
NPHP3-204ENST00000469232 HS1BP3Q53T59 392 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 DCAF17Q5H9S7 520 aaPredicted RBP8.81□□□□□ -1
NPHP3-204ENST00000469232 TCERG1LQ5VWI1 586 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 MFSD5Q6N075 450 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 TRIM65Q6PJ69 517 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 TRAPPC11Q7Z392 1133 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 LIMS2Q7Z4I7 341 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 C1orf127Q8N9H9 656 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 TC2NQ8N9U0 490 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 TTC13Q8NBP0 860 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 FBXL13Q8NEE6 735 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 TAS1R2Q8TE23 839 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 SEPT8Q92599 483 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 TAF4BQ92750 862 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 SYN2Q92777 582 aaPredicted RBP8.81□□□□□ -1
NPHP3-204ENST00000469232 SEMA4DQ92854 862 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 TATDN2Q93075 761 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 JAKMIP2Q96AA8 810 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 FNBP1Q96RU3 617 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 DNAJC7Q99615 494 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 INTS2Q9H0H0 1204 aaKnown RBP8.81□□□□□ -1
NPHP3-204ENST00000469232 XYLT2Q9H1B5 865 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 FAM124BQ9H5Z6 455 aaPredicted RBP8.81□□□□□ -1
NPHP3-204ENST00000469232 RAB20Q9NX57 234 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 CEP72Q9P209 647 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 ATP11BQ9Y2G3 1177 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 SCN5AQ14524 2016 aa8.81□□□□□ -1
NPHP3-204ENST00000469232 SMIM28A0A1B0GU29 152 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.8□□□□□ -1
NPHP3-204ENST00000469232 HLA-DRAP01903 254 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 NFICP08651 508 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 DLATP10515 647 aaKnown RBP8.8□□□□□ -1
NPHP3-204ENST00000469232 HARSP12081 509 aaKnown RBP8.8□□□□□ -1
NPHP3-204ENST00000469232 UCHL3P15374 230 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 SLC9A1P19634 815 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 KLK7P49862 253 aa8.8□□□□□ -1
NPHP3-204ENST00000469232 FXR1P51114 621 aaKnown RBP eCLIP8.8□□□□□ -1
NPHP3-204ENST00000469232 ZBED6P86452 979 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms