RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 CASRP41180 1078 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 CDC42EP1Q00587 391 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 PPP4R3AQ6IN85 833 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 DRC7Q8IY82 874 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 ULK2Q8IYT8 1036 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 KIAA0319LQ8IZA0 1049 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 PQLC1Q8N2U9 271 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 OR7D4Q8NG98 312 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 OR5M3Q8NGP4 307 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 SLC25A43Q8WUT9 341 aaPredicted RBP6.45□□□□□ -1.38
LSM5-209ENST00000468872 NRDE2Q9H7Z3 1164 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 BCO1Q9HAY6 547 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 TDP1Q9NUW8 608 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 GPRC5DQ9NZD1 345 aa6.45□□□□□ -1.38
LSM5-209ENST00000468872 HRGP04196 525 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 AMY1AP04745 511 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 HK1P19367 917 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 PTGS2P35354 604 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 SAFBQ15424 915 aaKnown RBP eCLIP6.44□□□□□ -1.38
LSM5-209ENST00000468872 IL31Q6EBC2 164 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 NPNTQ6UXI9 565 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 Q6ZPA2 131 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 MRGPRGQ86SM5 289 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 COL23A1Q86Y22 540 aaPredicted RBP6.44□□□□□ -1.38
LSM5-209ENST00000468872 ZGPATQ8N5A5 531 aaKnown RBP6.44□□□□□ -1.38
LSM5-209ENST00000468872 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 CCHCR1Q8TD31 782 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 PMM1Q92871 262 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 MRGPRX4Q96LA9 322 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 PRRX2Q99811 253 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 CPPED1Q9BRF8 314 aaPredicted RBP6.44□□□□□ -1.38
LSM5-209ENST00000468872 KRTAP17-1Q9BYP8 105 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 ZNF700Q9H0M5 742 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 EPC1Q9H2F5 836 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 LDAHQ9H6V9 325 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 MANSC1Q9H8J5 431 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 KMT5AQ9NQR1 393 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 C11orf21Q9P2W6 132 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 USP25Q9UHP3 1055 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 STXBP5LQ9Y2K9 1186 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 NR2E3Q9Y5X4 410 aa6.44□□□□□ -1.38
LSM5-209ENST00000468872 ANO9A1A5B4 782 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 WNT10BO00744 389 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 SLC16A6O15403 523 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 ITGA10O75578 1167 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 PHKG2P15735 406 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 KRT4P19013 534 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 CRHR1P34998 444 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 IL12RB1P42701 662 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 NEK3P51956 506 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 AGFG1P52594 562 aaKnown RBP6.43□□□□□ -1.38
LSM5-209ENST00000468872 HK3P52790 923 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 PER3P56645 1201 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 MRPL49Q13405 166 aaKnown RBP6.43□□□□□ -1.38
LSM5-209ENST00000468872 HDAC1Q13547 482 aaPredicted RBP6.43□□□□□ -1.38
LSM5-209ENST00000468872 ANO6Q4KMQ2 910 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 THEMIS2Q5TEJ8 643 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 SWSAP1Q6NVH7 229 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 CCDC149Q6ZUS6 474 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 MRGPREQ86SM8 312 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 TRMT2AQ8IZ69 625 aaKnown RBP6.43□□□□□ -1.38
LSM5-209ENST00000468872 ZNF276Q8N554 614 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 REPS2Q8NFH8 660 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 FBXO18Q8NFZ0 1043 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 PLBD2Q8NHP8 589 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 KLHDC4Q8TBB5 520 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 FBXO41Q8TF61 875 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 HAS1Q92839 578 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 IL17RAQ96F46 866 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 CLPTM1LQ96KA5 538 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 UHRF1Q96T88 793 aaPredicted RBP6.43□□□□□ -1.38
LSM5-209ENST00000468872 L1RE1Q9UN81 338 aa6.43□□□□□ -1.38
LSM5-209ENST00000468872 ABCC9O60706 1549 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 RPLP2P05387 115 aaKnown RBP6.42□□□□□ -1.38
LSM5-209ENST00000468872 NBPF7P0C2Y1 421 aaPredicted RBP6.42□□□□□ -1.38
LSM5-209ENST00000468872 GUCY1A2P33402 732 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 INHBEP58166 350 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 DUSP2Q05923 314 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 NOGQ13253 232 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 SMN1Q16637 294 aaKnown RBP6.42□□□□□ -1.38
LSM5-209ENST00000468872 KHDC1Q4VXA5 237 aaKnown RBP6.42□□□□□ -1.38
LSM5-209ENST00000468872 PCSK4Q6UW60 755 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 IFI44Q8TCB0 444 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 CDK5RAP3Q96JB5 506 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 TMX3Q96JJ7 454 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 RPS6KC1Q96S38 1066 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 CPEB1Q9BZB8 566 aaKnown RBP6.42□□□□□ -1.38
LSM5-209ENST00000468872 BHMT2Q9H2M3 363 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 LANCL2Q9NS86 450 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 SORCS3Q9UPU3 1222 aa6.42□□□□□ -1.38
LSM5-209ENST00000468872 MYBBP1AQ9BQG0 1328 aaKnown RBP6.42□□□□□ -1.38
LSM5-209ENST00000468872 PMM2O15305 246 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 GASTP01350 101 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 GYPEP15421 78 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 FPR1P21462 350 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 NR4A1P22736 598 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 GZMKP49863 264 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 FAM193AP78312 1265 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 ATP8B2P98198 1209 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 TLE1Q04724 770 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms