RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 ITGAVP06756 1048 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 CLTBP09497 229 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 HOXC6P09630 235 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 FGFR2P21802 821 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 ITGB8P26012 769 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 CNGA1P29973 690 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 MRE11P49959 708 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 FHL2Q14192 279 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 PRKD1Q15139 912 aaPredicted RBP5.09□□□□□ -1.59
SSR3-204ENST00000467733 AAK1Q2M2I8 961 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 TWISTNBQ3B726 338 aaPredicted RBP5.09□□□□□ -1.59
SSR3-204ENST00000467733 SLC10A6Q3KNW5 377 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 LRRC24Q50LG9 513 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 EMC4Q5J8M3 183 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 GJC2Q5T442 439 aaPredicted RBP5.09□□□□□ -1.59
SSR3-204ENST00000467733 STEAP3Q658P3 488 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 MRM1Q6IN84 353 aaKnown RBP5.09□□□□□ -1.59
SSR3-204ENST00000467733 RALYLQ86SE5 291 aaKnown RBP5.09□□□□□ -1.59
SSR3-204ENST00000467733 CCAR1Q8IX12 1150 aaKnown RBP5.09□□□□□ -1.59
SSR3-204ENST00000467733 TRPV1Q8NER1 839 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 FRS2Q8WU20 508 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 DIO2Q92813 273 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 TSR2Q969E8 191 aaKnown RBP5.09□□□□□ -1.59
SSR3-204ENST00000467733 CCDC140Q96MF4 163 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 P2RX7Q99572 595 aaKnown RBP5.09□□□□□ -1.59
SSR3-204ENST00000467733 EPHX3Q9H6B9 360 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 SEC61A2Q9H9S3 476 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 AS3MTQ9HBK9 375 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 TMOD4Q9NZQ9 345 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 FLRT1Q9NZU1 646 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 ING1Q9UK53 422 aaPredicted RBP5.09□□□□□ -1.59
SSR3-204ENST00000467733 ADAM29Q9UKF5 820 aa5.09□□□□□ -1.59
SSR3-204ENST00000467733 PARP14Q460N5 1801 aa5.09□□□□□ -1.6
SSR3-204ENST00000467733 CACNA1BQ00975 2339 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 WDR87Q6ZQQ6 2873 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 ROBO3Q96MS0 1386 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 MYH1P12882 1939 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 TCRBV5S2A0A599 114 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 SLC15A5A6NIM6 579 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 H7BY64 318 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 APAF1O14727 1248 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 GLRX3O76003 335 aaKnown RBP5.08□□□□□ -1.6
SSR3-204ENST00000467733 SLC5A1P13866 664 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 HOXC12P31275 282 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 CYP2C19P33261 490 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 BCL6P41182 706 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 BACE1P56817 501 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 CCNA1P78396 465 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 TLE2Q04725 743 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 PICALMQ13492 652 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 GRB14Q14449 540 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 ZNF227Q86WZ6 799 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 LRRC47Q8N1G4 583 aaKnown RBP5.08□□□□□ -1.6
SSR3-204ENST00000467733 ST13P5Q8NFI4 369 aaPredicted RBP5.08□□□□□ -1.6
SSR3-204ENST00000467733 PHOSPHO1Q8TCT1 267 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 BTN2A2Q8WVV5 523 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 SREK1Q8WXA9 508 aaKnown RBP5.08□□□□□ -1.6
SSR3-204ENST00000467733 SUCLG2Q96I99 432 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 MRGPRX3Q96LB0 322 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 PAGR1Q9BTK6 254 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.08□□□□□ -1.6
SSR3-204ENST00000467733 C9orf78Q9NZ63 289 aaPredicted RBP5.08□□□□□ -1.6
SSR3-204ENST00000467733 HSPBP1Q9NZL4 362 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 SIRPGQ9P1W8 387 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 RBPJLQ9UBG7 517 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 RABGAP1Q9Y3P9 1069 aa5.08□□□□□ -1.6
SSR3-204ENST00000467733 COL11A1P12107 1806 aaPredicted RBP5.07□□□□□ -1.6
SSR3-204ENST00000467733 MROH7-TTC4A0A0A0MT08 1334 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 C19orf81C9J6K1 198 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 MEFVO15553 781 aaPredicted RBP5.07□□□□□ -1.6
SSR3-204ENST00000467733 SEPT4O43236 478 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 MAFKO60675 156 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 CNMDO75829 334 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 ALDH1L1O75891 902 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 CPP00450 1065 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 CHGBP05060 677 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 ASNSP08243 561 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 SNRPB2P08579 225 aaKnown RBP5.07□□□□□ -1.6
SSR3-204ENST00000467733 ADCYAP1R1P41586 468 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 KCNJ6P48051 423 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 KCNQ1P51787 676 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 TFF2Q03403 129 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 ABHD18Q0P651 414 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 FOXE3Q13461 319 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 RRP1BQ14684 758 aaKnown RBP5.07□□□□□ -1.6
SSR3-204ENST00000467733 LRRC41Q15345 812 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 RAB30Q15771 203 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 SMN1Q16637 294 aaKnown RBP5.07□□□□□ -1.6
SSR3-204ENST00000467733 RABL6Q3YEC7 729 aaPredicted RBP5.07□□□□□ -1.6
SSR3-204ENST00000467733 MIIPQ5JXC2 388 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 CCDC174Q6PII3 467 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 CCDC129Q6ZRS4 1044 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 DZIP1Q86YF9 867 aaKnown RBP5.07□□□□□ -1.6
SSR3-204ENST00000467733 ZGPATQ8N5A5 531 aaKnown RBP5.07□□□□□ -1.6
SSR3-204ENST00000467733 LPIN2Q92539 896 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 FERMT2Q96AC1 680 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 EDC3Q96F86 508 aaKnown RBP5.07□□□□□ -1.6
SSR3-204ENST00000467733 SGSM3Q96HU1 749 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 KAZALD1Q96I82 304 aa5.07□□□□□ -1.6
SSR3-204ENST00000467733 BICC1Q9H694 974 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms