RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 GADL1Q6ZQY3 521 aa15.74■□□□□ 0.11
PRPF38B-204ENST00000467302 TRMT10CQ7L0Y3 403 aaKnown RBP15.74■□□□□ 0.11
PRPF38B-204ENST00000467302 RIOX2Q8IUF8 465 aa15.74■□□□□ 0.11
PRPF38B-204ENST00000467302 MAGEC3Q8TD91 643 aa15.74■□□□□ 0.11
PRPF38B-204ENST00000467302 HELQQ8TDG4 1101 aa15.74■□□□□ 0.11
PRPF38B-204ENST00000467302 AAASQ9NRG9 546 aa15.74■□□□□ 0.11
PRPF38B-204ENST00000467302 COQ4Q9Y3A0 265 aa15.74■□□□□ 0.11
PRPF38B-204ENST00000467302 SPDYE5A6NIY4 337 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 SPATA31C2B4DYI2 1134 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 CXCL11O14625 94 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 FSCN2O14926 492 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 GRIN3BO60391 1043 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 ECEL1O95672 775 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 PSAPP07602 524 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 GSTA1P08263 222 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 CDR2Q01850 454 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 SNCBQ16143 134 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 FAM102BQ5T8I3 360 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 WLSQ5T9L3 541 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 PLA2G4FQ68DD2 849 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 CCDC50Q8IVM0 306 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 ANKRD35Q8N283 1001 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 PPM1KQ8N3J5 372 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 SLC17A8Q8NDX2 589 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 DDX1Q92499 740 aaKnown RBP15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 ATP6V0A1Q93050 837 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 ZNF653Q96CK0 615 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 OTUD5Q96G74 571 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 JPH1Q9HDC5 661 aaPredicted RBP15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.73■□□□□ 0.112e-6■■■■■ 29.3
PRPF38B-204ENST00000467302 WHRNQ9P202 907 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 GABBR1Q9UBS5 961 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 TULP1O00294 542 aaPredicted RBP15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 IRF6O14896 467 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 MGRN1O60291 552 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 ATP2C2O75185 946 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 ADSSP30520 456 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 EPHX2P34913 555 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 NCKAP1LP55160 1127 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 IRX3P78415 501 aaPredicted RBP15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 MAP2K1Q02750 393 aaPredicted RBP15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 STXBP2Q15833 593 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 PREPLQ4J6C6 727 aaPredicted RBP15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 RHBDF2Q6PJF5 856 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 ANO5Q75V66 913 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 EXOC3L1Q86VI1 746 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 POP1Q99575 1024 aaKnown RBP15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 SLC9A2Q9UBY0 812 aa15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 TPX2Q9ULW0 747 aaKnown RBP15.73■□□□□ 0.11
PRPF38B-204ENST00000467302 CLDN3O15551 220 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 GPC3P51654 580 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 PEX3P56589 373 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 PPIL2Q13356 520 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 SNRNP35Q16560 246 aaKnown RBP15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 SWSAP1Q6NVH7 229 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 TAOK1Q7L7X3 1001 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 CBWD2Q8IUF1 395 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 MYCBPQ99417 103 aaPredicted RBP15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 GPRC5CQ9NQ84 441 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 SAMD15Q9P1V8 674 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 BTBD7Q9P203 1132 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 SCN4AP35499 1836 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 DOCK5Q9H7D0 1870 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 GOLGA8IPA6NC78 632 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 GOLGA8JA6NMD2 632 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 SLC16A4O15374 487 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 ICAM3P32942 547 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 CALCOCO2Q13137 446 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 KRT39Q6A163 491 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 ACAD10Q6JQN1 1059 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 PARD3BQ8TEW8 1205 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 CEP170P1Q96L14 293 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 ELAC2Q9BQ52 826 aaKnown RBP15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 DDX23Q9BUQ8 820 aaKnown RBP15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 CDC42EP4Q9H3Q1 356 aaKnown RBP15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 KCNH4Q9UQ05 1017 aa15.72■□□□□ 0.11
PRPF38B-204ENST00000467302 ZNF862O60290 1169 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 OAS1P00973 400 aaKnown RBP15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 DLATP10515 647 aaKnown RBP15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 IVDP26440 423 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 MAP2K2P36507 400 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 PDE6CP51160 858 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 ACTR2P61160 394 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 CNTN2Q02246 1040 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 SP4Q02446 784 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 TTLL12Q14166 644 aaPredicted RBP15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 PPP1R7Q15435 360 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 CCDC38Q502W7 563 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 RPAINQ86UA6 219 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 CLMNQ96JQ2 1002 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 SERPINB12Q96P63 405 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 SPATC1LQ9H0A9 340 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 TMEM8AQ9HCN3 771 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 AGTPBP1Q9UPW5 1226 aa15.71■□□□□ 0.11
PRPF38B-204ENST00000467302 LRRC37A2A6NM11 1700 aa15.71■□□□□ 0.1
PRPF38B-204ENST00000467302 SNX3O60493 162 aa15.7■□□□□ 0.1
PRPF38B-204ENST00000467302 PEX10O60683 326 aa15.7■□□□□ 0.1
PRPF38B-204ENST00000467302 VIMP08670 466 aaKnown RBP15.7■□□□□ 0.1
PRPF38B-204ENST00000467302 ITIH2P19823 946 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms