RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 ARHGAP28Q9P2N2 729 aa20.64■□□□□ 0.9
LIMS2-212ENST00000466410 ARID2Q68CP9 1835 aa20.64■□□□□ 0.89
LIMS2-212ENST00000466410 CCT8L1PA6NM43 557 aa20.64■□□□□ 0.89
LIMS2-212ENST00000466410 DGAT1O75907 488 aa20.64■□□□□ 0.89
LIMS2-212ENST00000466410 SSTR3P32745 418 aaPredicted RBP20.64■□□□□ 0.89
LIMS2-212ENST00000466410 VPS41P49754 854 aa20.64■□□□□ 0.89
LIMS2-212ENST00000466410 PTK6Q13882 451 aa20.64■□□□□ 0.89
LIMS2-212ENST00000466410 TAOK1Q7L7X3 1001 aa20.64■□□□□ 0.89
LIMS2-212ENST00000466410 MCPH1Q8NEM0 835 aa20.64■□□□□ 0.89
LIMS2-212ENST00000466410 IPO4Q8TEX9 1081 aaKnown RBP20.64■□□□□ 0.89
LIMS2-212ENST00000466410 PWWP2AQ96N64 755 aa20.64■□□□□ 0.89
LIMS2-212ENST00000466410 FAM118BQ9BPY3 351 aa20.64■□□□□ 0.89
LIMS2-212ENST00000466410 POLR3FQ9H1D9 316 aaPredicted RBP20.64■□□□□ 0.89
LIMS2-212ENST00000466410 HAUS2Q9NVX0 235 aa20.64■□□□□ 0.89
LIMS2-212ENST00000466410 FOXO6A8MYZ6 492 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 HLA-DRAP01903 254 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 TNNI1P19237 187 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 SLC1A1P43005 524 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 NSFP46459 744 aaKnown RBP20.63■□□□□ 0.89
LIMS2-212ENST00000466410 SWT1Q5T5J6 900 aaKnown RBP20.63■□□□□ 0.89
LIMS2-212ENST00000466410 TDRD10Q5VZ19 366 aaKnown RBP20.63■□□□□ 0.89
LIMS2-212ENST00000466410 FAM81BQ96LP2 452 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 CYP26B1Q9NR63 512 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 CTNNAL1Q9UBT7 734 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 PTPRJQ12913 1337 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 EXTL3O43909 919 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 CYP1A1P04798 512 aaPredicted RBP20.63■□□□□ 0.89
LIMS2-212ENST00000466410 RALAP11233 206 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 ACOT2P49753 483 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 LIG4P49917 911 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 NLRP11P59045 1033 aaKnown RBP20.63■□□□□ 0.89
LIMS2-212ENST00000466410 PRKCEQ02156 737 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 CENPCQ03188 943 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 LRRC14Q15048 493 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 KYNUQ16719 465 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 ZACNQ401N2 412 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 WDR44Q5JSH3 913 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 MON1BQ7L1V2 547 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 PASD1Q8IV76 773 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 P3H4Q92791 437 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 ARHGEF2Q92974 986 aaKnown RBP20.63■□□□□ 0.89
LIMS2-212ENST00000466410 IFT74Q96LB3 600 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 UMODL1Q5DID0 1318 aa20.63■□□□□ 0.89
LIMS2-212ENST00000466410 PSAPP07602 524 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 MYBL1P10243 752 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 DSG3P32926 999 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 XRRA1Q6P2D8 792 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 ZNF677Q86XU0 584 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 CCDC50Q8IVM0 306 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 FUKQ8N0W3 1084 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 ANKS4BQ8N8V4 417 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 MAIP1Q8WWC4 291 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 FNBP1Q96RU3 617 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 C11orf70Q9BRQ4 267 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 ATP6V0A4Q9HBG4 840 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.62■□□□□ 0.89
LIMS2-212ENST00000466410 PROSCO94903 275 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 TTC4O95801 387 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 GAS8O95995 478 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 C4BPAP04003 597 aaKnown RBP20.62■□□□□ 0.89
LIMS2-212ENST00000466410 ADCY8P40145 1251 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 PIK3CAP42336 1068 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 CLDN10P78369 228 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 MGARPQ8TDB4 240 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 SERPINB12Q96P63 405 aa20.62■□□□□ 0.89
LIMS2-212ENST00000466410 JPH1Q9HDC5 661 aaPredicted RBP20.62■□□□□ 0.89
LIMS2-212ENST00000466410 VNN1O95497 513 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 GHRP10912 638 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 ATF2P15336 505 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 RTP1P59025 263 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 TAS2R40P59535 323 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 ENPEPQ07075 957 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 PSMD6Q15008 389 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 MTERF2Q49AM1 385 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 SYDE1Q6ZW31 735 aaPredicted RBP20.61■□□□□ 0.89
LIMS2-212ENST00000466410 ATL2Q8NHH9 583 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 TRIM11Q96F44 468 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 SAMD15Q9P1V8 674 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 ANAPC5Q9UJX4 755 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 SRCAPQ6ZRS2 3230 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 MAFGO15525 162 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 ACO1P21399 889 aaKnown RBP20.61■□□□□ 0.89
LIMS2-212ENST00000466410 MAN1A1P33908 653 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 ACTR2P61160 394 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 KLF1Q13351 362 aaPredicted RBP20.61■□□□□ 0.89
LIMS2-212ENST00000466410 SNRNP48Q6IEG0 339 aaKnown RBP20.61■□□□□ 0.89
LIMS2-212ENST00000466410 GRK7Q8WTQ7 553 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 HAPLN2Q9GZV7 340 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 CD248Q9HCU0 757 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 HOMER3Q9NSC5 361 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 UTRNP46939 3433 aa20.61■□□□□ 0.89
LIMS2-212ENST00000466410 TMEM120BA0PK00 339 aa20.6■□□□□ 0.89
LIMS2-212ENST00000466410 BPIFB4P59827 614 aa20.6■□□□□ 0.89
LIMS2-212ENST00000466410 ITIH4Q14624 930 aa20.6■□□□□ 0.89
LIMS2-212ENST00000466410 CYB5D1Q6P9G0 228 aa20.6■□□□□ 0.89
LIMS2-212ENST00000466410 ZBTB45Q96K62 511 aaPredicted RBP20.6■□□□□ 0.89
LIMS2-212ENST00000466410 APOBEC3GQ9HC16 384 aaKnown RBP20.6■□□□□ 0.89
LIMS2-212ENST00000466410 SLC9A2Q9UBY0 812 aa20.6■□□□□ 0.89
LIMS2-212ENST00000466410 NEU2Q9Y3R4 380 aa20.6■□□□□ 0.89
LIMS2-212ENST00000466410 DKC1O60832 514 aaKnown RBP eCLIP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms