RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 RIPK2O43353 540 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 ATP9AO75110 1047 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 PROSCO94903 275 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 SBF1O95248 1867 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 OATP04181 439 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 CALB1P05937 261 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 MMEP08473 750 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 WEE2P0C1S8 567 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 TAL1P17542 331 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 MAPK4P31152 587 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 CDH5P33151 784 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 RDXP35241 583 aaKnown RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 ARL2P36404 184 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 LIG4P49917 911 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 DNA2P51530 1060 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 ZNF132P52740 706 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 MAP2K1Q02750 393 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 POU5F1BQ06416 359 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 KLF1Q13351 362 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 BAATQ14032 418 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 NEDD9Q14511 834 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 ITIH4Q14624 930 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 MESDQ14696 234 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 STXBP2Q15833 593 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 NBPF9Q3BBW0 867 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 LACTB2Q53H82 288 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 SGO2Q562F6 1265 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 EAPPQ56P03 285 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 DALRD3Q5D0E6 543 aaKnown RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 GKAP1Q5VSY0 366 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 FAM160B1Q5W0V3 765 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 CDCA2Q69YH5 1023 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 SNRNP48Q6IEG0 339 aaKnown RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 NSMFQ6X4W1 530 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 CATSPERGQ6ZRH7 1159 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 PAXIP1Q6ZW49 1069 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 POLNQ7Z5Q5 900 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 SLC47A2Q86VL8 602 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 WDR49Q8IV35 697 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 CCDC50Q8IVM0 306 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 BRSK2Q8IWQ3 736 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 RHOT1Q8IXI2 618 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 DHX37Q8IY37 1157 aaKnown RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 CCDC105Q8IYK2 499 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 CACNA2D3Q8IZS8 1091 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 ABRAQ8N0Z2 381 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 CPXCR1Q8N123 301 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 SH2D3CQ8N5H7 860 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 OTUD6BQ8N6M0 293 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 UBR7Q8N806 425 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 ANKS4BQ8N8V4 417 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 ATL2Q8NHH9 583 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 TAS1R2Q8TE23 839 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 FNIP1Q8TF40 1166 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 TCP11Q8WWU5 503 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 SLC7A3Q8WY07 619 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 KRT35Q92764 455 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 SEMA4DQ92854 862 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 ATG4CQ96DT6 458 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 CYFIP2Q96F07 1278 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 CHMP6Q96FZ7 201 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 TTC25Q96NG3 672 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 UIMC1Q96RL1 719 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 PCDHB18PQ96TA0 734 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 SGIP1Q9BQI5 828 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 TRIM51Q9BSJ1 452 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 C2orf40Q9H1Z8 148 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 PCIF1Q9H4Z3 704 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 BCAS3Q9H6U6 928 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 ERVK-5Q9HDB9 667 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 UBN1Q9NPG3 1134 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 A1CFQ9NQ94 594 aaKnown RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 TMOD4Q9NZQ9 345 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 SENP1Q9P0U3 644 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 GABBR1Q9UBS5 961 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 FETUBQ9UGM5 382 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 LGALS13Q9UHV8 139 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 ANAPC7Q9UJX3 599 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 AGO2Q9UKV8 859 aaKnown RBP7.31□□□□□ -1.24
CDHR3-204ENST00000466351 STRIP2Q9ULQ0 834 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 ATP8A1Q9Y2Q0 1164 aa7.31□□□□□ -1.24
CDHR3-204ENST00000466351 UMODL1Q5DID0 1318 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 ADGRA3Q8IWK6 1321 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 ANKRD63C9JTQ0 380 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 E7EVH7 732 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 O00370 1275 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 RASGRF2O14827 1237 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 RGS16O15492 202 aaPredicted RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 RGS20O76081 388 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 HLA-DRAP01903 254 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 C4BPAP04003 597 aaKnown RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 CLTAP09496 248 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 PYGMP11217 842 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 MYCLP12524 364 aaPredicted RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 TSHRP16473 764 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 ACO1P21399 889 aaKnown RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 PIK3CAP42336 1068 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 RPL21P46778 160 aaKnown RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 POLGP54098 1239 aaPredicted RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 ATN1P54259 1190 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms