RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 LNX1Q8TBB1 728 aaPredicted RBP11.08□□□□□ -0.64
CD40-204ENST00000466205 FAM84AQ96KN4 292 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 FAM213AQ9BRX8 229 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 STRA6Q9BX79 667 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 LRRC27Q9C0I9 530 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 CUEDC2Q9H467 287 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 ST6GALNAC4Q9H4F1 302 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 POMKQ9H5K3 350 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 EPHX3Q9H6B9 360 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 RXFP1Q9HBX9 757 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 OLFML3Q9NRN5 406 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 STK39Q9UEW8 545 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 CPSF3Q9UKF6 684 aaKnown RBP11.08□□□□□ -0.64
CD40-204ENST00000466205 AGO2Q9UKV8 859 aaKnown RBP11.08□□□□□ -0.64
CD40-204ENST00000466205 EXOC7Q9UPT5 735 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 PCDHB13Q9Y5F0 798 aa11.08□□□□□ -0.64
CD40-204ENST00000466205 TRIP11Q15643 1979 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 TTC26A0AVF1 554 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 FAM86C2PA6NEL3 165 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 TMEM189-UBE2V1I3L0A0 370 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 PPEF2O14830 753 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 ACTN4O43707 911 aaKnown RBP11.07□□□□□ -0.64
CD40-204ENST00000466205 ABCD1P33897 745 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 NDUFA8P51970 172 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 WNT7BP56706 349 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 FAM26FQ5R3K3 315 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 SLFN12LQ6IEE8 588 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 ARMCX5Q6P1M9 558 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 RSPO2Q6UXX9 243 aaPredicted RBP11.07□□□□□ -0.64
CD40-204ENST00000466205 FSIP1Q8NA03 581 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 SUSD6Q92537 303 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 KCNN1Q92952 543 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 HVCN1Q96D96 273 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 DDX27Q96GQ7 796 aaKnown RBP11.07□□□□□ -0.64
CD40-204ENST00000466205 C7orf25Q9BPX7 421 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 CLSTN3Q9BQT9 956 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 CBWD1Q9BRT8 395 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 PHF7Q9BWX1 381 aaPredicted RBP11.07□□□□□ -0.64
CD40-204ENST00000466205 ADAM7Q9H2U9 754 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 GOLPH3LQ9H4A5 285 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 SFXN1Q9H9B4 322 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 PLEKHA5Q9HAU0 1116 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 SLC39A2Q9NP94 309 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 UBQLN1Q9UMX0 589 aaKnown RBP11.07□□□□□ -0.64
CD40-204ENST00000466205 ATP6V1DQ9Y5K8 247 aa11.07□□□□□ -0.64
CD40-204ENST00000466205 TIMM13Q9Y5L4 95 aaPredicted RBP11.07□□□□□ -0.64
CD40-204ENST00000466205 CCDC195A0A1B0GUA6 201 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 PRR29P0C7W0 189 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 HOXB8P17481 243 aaPredicted RBP11.06□□□□□ -0.64
CD40-204ENST00000466205 SCP2P22307 547 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 FGFR3P22607 806 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 CMA1P23946 247 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 OR1D2P34982 312 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 SYKP43405 635 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 CDR1P51861 262 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 ELAVL2Q12926 359 aaKnown RBP11.06□□□□□ -0.64
CD40-204ENST00000466205 TMEM132DQ14C87 1099 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 CRELD2Q6UXH1 353 aaPredicted RBP11.06□□□□□ -0.64
CD40-204ENST00000466205 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.06□□□□□ -0.64
CD40-204ENST00000466205 UNC13DQ70J99 1090 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 PIK3R5Q8WYR1 880 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 PAGE5Q96GU1 130 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.06□□□□□ -0.64
CD40-204ENST00000466205 DZANK1Q9NVP4 752 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 PRKAG3Q9UGI9 489 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 MUTYHQ9UIF7 546 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 CDY1Q9Y6F8 540 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 STYXL1Q9Y6J8 313 aa11.06□□□□□ -0.64
CD40-204ENST00000466205 VWA8A3KMH1 1905 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 CITO14578 2027 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 CLIC2O15247 247 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 TRAPPC3O43617 180 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 RPL9P32969 192 aaKnown RBP11.05□□□□□ -0.64
CD40-204ENST00000466205 NUCB2P80303 420 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 ITIH3Q06033 890 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 ALCAMQ13740 583 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 PDCD11Q14690 1871 aaKnown RBP11.05□□□□□ -0.64
CD40-204ENST00000466205 ZBTB6Q15916 424 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 KYAT1Q16773 422 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 ATAT1Q5SQI0 421 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 VARS2Q5ST30 1063 aaKnown RBP11.05□□□□□ -0.64
CD40-204ENST00000466205 LMBRD2Q68DH5 695 aaPredicted RBP11.05□□□□□ -0.64
CD40-204ENST00000466205 SCARA3Q6AZY7 606 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 DSTYKQ6XUX3 929 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 RNF135Q8IUD6 432 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 EFCAB13Q8IY85 973 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 RDH13Q8NBN7 331 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 KREMEN2Q8NCW0 462 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 BEST2Q8NFU1 509 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 RIPOR3Q96MK2 946 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 POP1Q99575 1024 aaKnown RBP11.05□□□□□ -0.64
CD40-204ENST00000466205 SCAND2PQ9GZW5 306 aaPredicted RBP11.05□□□□□ -0.64
CD40-204ENST00000466205 TMEM206Q9H813 350 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 MAGEF1Q9HAY2 307 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 PIDD1Q9HB75 910 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 RBAKQ9NYW8 714 aaPredicted RBP11.05□□□□□ -0.64
CD40-204ENST00000466205 FNIP2Q9P278 1114 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 HPSEQ9Y251 543 aa11.05□□□□□ -0.64
CD40-204ENST00000466205 BRWD1Q9NSI6 2320 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms