RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 XKR4Q5GH76 650 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 GJB7Q6PEY0 223 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 C1orf127Q8N9H9 656 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 GSTCDQ8NEC7 633 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 CPLX3Q8WVH0 158 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 RPS6KC1Q96S38 1066 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 ELAC1Q9H777 363 aaKnown RBP18.58■□□□□ 0.57
PTPRU-206ENST00000465525 GOLGA2P5Q9HBQ8 144 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 CACNG4Q9UBN1 327 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 GIT1Q9Y2X7 761 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 PTPRSQ13332 1948 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 GTPBP10A4D1E9 387 aaKnown RBP18.57■□□□□ 0.56
PTPRU-206ENST00000465525 H0YGN5 161 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 CST3P01034 146 aaPredicted RBP18.57■□□□□ 0.56
PTPRU-206ENST00000465525 POMCP01189 267 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 KRT19P08727 400 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 KCNE1P15382 129 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 MLLT1Q03111 559 aaPredicted RBP18.57■□□□□ 0.56
PTPRU-206ENST00000465525 SOX4Q06945 474 aaPredicted RBP18.57■□□□□ 0.56
PTPRU-206ENST00000465525 CLLU1OSQ5K130 101 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 TRIM65Q6PJ69 517 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.57■□□□□ 0.56
PTPRU-206ENST00000465525 FBXL13Q8NEE6 735 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 LMO3Q8TAP4 145 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 HERVK_113Q902F9 699 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 SIX2Q9NPC8 291 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 TMEM161AQ9NX61 479 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 DPP3Q9NY33 737 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 LRFN2Q9ULH4 789 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 C2CD2Q9Y426 696 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 PCDHB7Q9Y5E2 793 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 UPP2O95045 317 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 AMHP03971 560 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 ITGB3P05106 788 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 MYL6P60660 151 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 CETN1Q12798 172 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 ZBTB6Q15916 424 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 SPOPLQ6IQ16 392 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 TMCO2Q7Z6W1 182 aaPredicted RBP18.57■□□□□ 0.56
PTPRU-206ENST00000465525 EHBP1Q8NDI1 1231 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 CACTINQ8WUQ7 758 aaKnown RBP18.57■□□□□ 0.56
PTPRU-206ENST00000465525 MTIF3Q9H2K0 278 aaKnown RBP18.57■□□□□ 0.56
PTPRU-206ENST00000465525 UBN1Q9NPG3 1134 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 RAB20Q9NX57 234 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 SIX4Q9UIU6 781 aa18.57■□□□□ 0.56
PTPRU-206ENST00000465525 SCN1AP35498 2009 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 RNF225M0QZC1 329 aaPredicted RBP18.56■□□□□ 0.56
PTPRU-206ENST00000465525 PPEF2O14830 753 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 P4HA2O15460 535 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 OFD1O75665 1012 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 NOL4O94818 638 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 KCNJ6P48051 423 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 AP3M2P53677 418 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 WDR5P61964 334 aaKnown RBP18.56■□□□□ 0.56
PTPRU-206ENST00000465525 NCOA4Q13772 614 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 DPY19L2P1Q6NXN4 242 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 GPIHBP1Q8IV16 184 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 ARHGEF19Q8IW93 802 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 NEK11Q8NG66 645 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 PDLIM2Q96JY6 352 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 PPP1R10Q96QC0 940 aaKnown RBP18.56■□□□□ 0.56
PTPRU-206ENST00000465525 GDF15Q99988 308 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 AJAP1Q9UKB5 411 aaPredicted RBP18.56■□□□□ 0.56
PTPRU-206ENST00000465525 DERAQ9Y315 318 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 COQ4Q9Y3A0 265 aa18.56■□□□□ 0.56
PTPRU-206ENST00000465525 FNDC1Q4ZHG4 1894 aaPredicted RBP18.56■□□□□ 0.56
PTPRU-206ENST00000465525 TNRC18O15417 2968 aaPredicted RBP18.56■□□□□ 0.56
PTPRU-206ENST00000465525 ITIH6Q6UXX5 1313 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 ZBBXA8MT70 800 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 GYPCP04921 128 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 TRIM21P19474 475 aaKnown RBP18.55■□□□□ 0.56
PTPRU-206ENST00000465525 POLR2BP30876 1174 aaKnown RBP18.55■□□□□ 0.56
PTPRU-206ENST00000465525 DEFB103AP81534 67 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 TRPC3Q13507 836 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 GLB1LQ6UWU2 654 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 NPAS4Q8IUM7 802 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 CRIPAKQ8N1N5 446 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 BEST2Q8NFU1 509 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 RABGGTAQ92696 567 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 TOP1MTQ969P6 601 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 GANQ9H2C0 597 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 UBQLN1Q9UMX0 589 aaKnown RBP18.55■□□□□ 0.56
PTPRU-206ENST00000465525 AGAP1Q9UPQ3 857 aa18.55■□□□□ 0.56
PTPRU-206ENST00000465525 PMM2O15305 246 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 THP07101 528 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 TBX2Q13207 712 aaPredicted RBP18.54■□□□□ 0.56
PTPRU-206ENST00000465525 ARID5BQ14865 1188 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 FAM117BQ6P1L5 589 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 NT5DC4Q86YG4 428 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 CXorf38Q8TB03 319 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 TATDN2Q93075 761 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 NLRC4Q9NPP4 1024 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 FHOD1Q9Y613 1164 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 CASP14P31944 242 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 FXR1P51114 621 aaKnown RBP eCLIP18.54■□□□□ 0.56
PTPRU-206ENST00000465525 POLR2FP61218 127 aaKnown RBP18.54■□□□□ 0.56
PTPRU-206ENST00000465525 CCDC173Q0VFZ6 552 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 NAB2Q15742 525 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 KLHDC7AQ5VTJ3 777 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 PHLDB3Q6NSJ2 640 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms